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Megf6 Gene Detail
Summary
  • Symbol
    Megf6
  • Name
    multiple EGF-like-domains 6
  • Synonyms
    2600001P17Rik, Egfl3, MGC:49785
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919351
    NCBI Gene: 230971
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:154170730-154275713 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 83.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919351
 protein coding gene Chr4:154170713-154275721 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029194
 protein coding gene Chr4:158424184-158537276 (+)
A/J MGP_AJ_G0029159
 protein coding gene Chr4:151774628-151880349 (+)
AKR/J MGP_AKRJ_G0029107
 protein coding gene Chr4:155918385-156028836 (+)
BALB/cJ MGP_BALBcJ_G0029175
 protein coding gene Chr4:152243902-152350953 (+)
C3H/HeJ MGP_C3HHeJ_G0028896
 protein coding gene Chr4:156454844-156564369 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029624
 protein coding gene Chr4:164089747-164204835 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026870
 protein coding gene Chr4:144077483-144184361 (+)
CAST/EiJ MGP_CASTEiJ_G0028309
 protein coding gene Chr4:153856209-153967329 (+)
CBA/J MGP_CBAJ_G0028858
 protein coding gene Chr4:169015337-169140137 (+)
DBA/2J MGP_DBA2J_G0029007
 protein coding gene Chr4:151801480-151909313 (+)
FVB/NJ MGP_FVBNJ_G0028971
 protein coding gene Chr4:151004058-151113831 (+)
LP/J MGP_LPJ_G0029097
 protein coding gene Chr4:158333421-158444759 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028998
 protein coding gene Chr4:171931879-172046554 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029656
 protein coding gene Chr4:156480349-156591663 (+)
PWK/PhJ MGP_PWKPhJ_G0028029
 protein coding gene Chr4:147885268-147998865 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027863
 protein coding gene Chr4:150779533-150892328 (+)
WSB/EiJ MGP_WSBEiJ_G0028389
 protein coding gene Chr4:156651105-156762452 (+)



Homology
more
  • Human Ortholog
    MEGF6, multiple EGF like domains 6
  • Vertebrate Orthologs
    11
  • Human Ortholog
    MEGF6, multiple EGF like domains 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    EGFL3
  • Links
    NCBI Gene ID: 1953
    neXtProt AC: NX_O75095
    UniProt: O75095

  • Chr Location
    1p36.32; chr1:3487942-3624757 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    143
  • Tissues
    17
  • cDNA Data
    60
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057751 Ensembl Gene Model | MGI Sequence Detail 104984 C57BL/6J ±  kb
transcript ENSMUST00000030897 Ensembl | MGI Sequence Detail 6851 Not Applicable  
polypeptide ENSMUSP00000030897 Ensembl | MGI Sequence Detail 1572 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 60
    cDNA 60

    Microarray probesets 13
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265607 Naba A, et al., Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression. Sci Rep. 2017 Jan 10;7:40495
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/06/2018
MGI 6.13 		The Jackson Laboratory