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Sapcd2 Gene Detail
Summary
  • Symbol
    Sapcd2
  • Name
    suppressor APC domain containing 2
  • Synonyms
    2010317E24Rik, 6030458L21Rik, ang
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919330
    NCBI Gene: 72080
Location & Maps
more
  • Sequence Map
    Chr2:25372330-25376803 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4474 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 17.20 cM, cytoband A3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SAPCD2, suppressor APC domain containing 2
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SAPCD2, suppressor APC domain containing 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C9orf140, p42.3
  • Links
    NCBI Gene ID: 89958
    neXtProt AC: NX_Q86UD0

  • Chr Location
    9q34.3; chr9:137062124-137070576 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
  • All Mutations and Alleles
    4
  • Targeted
    4
  • Incidental Mutations
    APF
Mice homozygous for disruptions in this gene display an apparently normal phenotype.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000012028 VEGA Gene Model | MGI Sequence Detail 4474 C57BL/6J ±  kb
transcript OTTMUST00000028576 VEGA | MGI Sequence Detail 1761 Not Applicable  
polypeptide OTTMUSP00000012926 VEGA | MGI Sequence Detail 446 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    53 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000031335 suppressor APC domain-containing protein 2
  • InterPro Domains
    IPR026828 Suppressor APC domain-containing protein 1/2
Molecular
Reagents
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  • All nucleic 35
    cDNA 32
    Primer pair 2
    Other 1

    Microarray probesets 4
Other
Accession IDs
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MGI:1925607, MGI:2139141
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory