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Rap2c
Gene Detail
 Symbol
Name
ID
Rap2c
RAP2C, member of RAS oncogene family
MGI:1919315
Synonyms 2010200P20Rik
Feature Type protein coding gene
Genetic Map
Chromosome X
28.03 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:51003912-51018018 bp, - strand
From VEGA annotation of GRCm38

  14107 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:99848  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: ras protein
Gene Tree: Rap2c

Human
homologs
Human Homolog RAP2C, RAP2C, member of RAS oncogene family
NCBI Gene ID 57826
neXtProt AC  NX_Q9Y3L5
Human Chr (Location)  Xq25; chrX:132203024-132219480 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Interactions
Rap2c interacts with 396 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (20 annotations)
Process GTP catabolic process, negative regulation of cell migration, ...
Component cytoplasm, cytosol, ...
Function GDP binding, GTP binding, ...
External Resources: FuncBase
Expression
cDNA source data(66)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(66) cDNA(66)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000017471 (Evidence)
Ensembl Gene ModelENSMUSG00000050029 (Evidence)
Entrez Gene72065 (Evidence)
UniGene43152
DFCITC1574303
DoTSDT.490047, DT.94395300
NIA Mouse Gene IndexU041239
Consensus CDS ProjectCCDS30121.1
International Mouse Knockout Project StatusRap2c
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017471 VEGA Gene Model | MGI Sequence Detail 14107 C57BL/6J ±  kb
transcript OTTMUST00000042423 VEGA | MGI Sequence Detail 3545 Not Applicable 
polypeptide OTTMUSP00000019067 VEGA | MGI Sequence Detail 183 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(6) UniProt(1)
Polymorphisms SNPs within 2kb(27 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR020849 Small GTPase superfamily, Ras type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013725 ras-related protein Rap-2c
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)
Other
accession IDs
MGI:2147851, MGI:2147945

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory