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Slc38a10 Gene Detail
Summary
  • Symbol
    Slc38a10
  • Name
    solute carrier family 38, member 10
  • Synonyms
    1810073N04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919305
    NCBI Gene: 72055
  • Gene Overview
    MyGene.info: SLC38A10
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:120103960-120151346 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 83.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    219 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919305
protein coding gene Chr11:120103951-120151351 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019492
protein coding gene Chr11:124542868-124591938 (-)
A/J MGP_AJ_G0019460
protein coding gene Chr11:119007344-119054698 (-)
AKR/J MGP_AKRJ_G0019430
protein coding gene Chr11:122587548-122635321 (-)
BALB/cJ MGP_BALBcJ_G0019435
protein coding gene Chr11:119363927-119411282 (-)
C3H/HeJ MGP_C3HHeJ_G0019241
protein coding gene Chr11:122908741-122956077 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019884
protein coding gene Chr11:128316637-128364889 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017509
protein coding gene Chr11:116013473-116061269 (-)
CAST/EiJ MGP_CASTEiJ_G0018795
protein coding gene Chr11:124393041-124442825 (-)
CBA/J MGP_CBAJ_G0019212
protein coding gene Chr11:133326508-133377462 (-)
DBA/2J MGP_DBA2J_G0019324
protein coding gene Chr11:118373351-118421816 (-)
FVB/NJ MGP_FVBNJ_G0019316
protein coding gene Chr11:118066625-118113820 (-)
LP/J MGP_LPJ_G0019396
protein coding gene Chr11:124850720-124899950 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019349
protein coding gene Chr11:132189501-132241911 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019923
protein coding gene Chr11:123269478-123320304 (-)
PWK/PhJ MGP_PWKPhJ_G0018561
protein coding gene Chr11:119801441-119849670 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018353
protein coding gene Chr11:123039010-123089931 (-)
WSB/EiJ MGP_WSBEiJ_G0018847
protein coding gene Chr11:123268117-123316447 (-)



Homology
more
  • Human Ortholog
    SLC38A10, solute carrier family 38 member 10
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC38A10, solute carrier family 38 member 10
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PP1744
  • Links
    NCBI Gene ID: 124565
    neXtProt AC: NX_Q9HBR0
    UniProt: Q9HBR0

  • Chr Location
    17q25.3; chr17:81244811-81295433 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    36 phenotypes from 2 alleles in 4 genetic backgrounds
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous null mice exhibit a fragile skeleton, reduced adiposity, lean body mass, body weight/length, long bone length and bone mineral density, increased creatinine levels, reduced amylase and serum albumin levels, increased energy efficiency and oxygen consumption, and altered liver physiology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000061306 Ensembl Gene Model | MGI Sequence Detail 47387 C57BL/6J ±  kb
    transcript ENSMUST00000179094 Ensembl | MGI Sequence Detail 4052 Not Applicable  
    polypeptide ENSMUSP00000136719 Ensembl | MGI Sequence Detail 1090 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 199
      cDNA 199

      Microarray probesets 10
    References
    more
    • Summaries
      All 38
      Developmental Gene Expression 4
      Gene Ontology 5
      Phenotypes 12
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:213427 Adissu HA, et al., Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen. Dis Model Mech. 2014 May;7(5):515-24

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/13/2018
    MGI 6.13
    The Jackson Laboratory