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1600020E01Rik Gene Detail
Summary
  • Symbol
    1600020E01Rik
  • Name
    RIKEN cDNA 1600020E01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1919262
    NCBI Gene: 72012
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:86527330-86564449 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 37.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    126 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919262
lncRNA gene Chr6:86526247-86582466 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004308
antisense lncRNA gene Chr6:87817793-87882827 (+)
A/J MGP_AJ_G0004286
antisense lncRNA gene Chr6:84430648-84487109 (+)
AKR/J MGP_AKRJ_G0004268
antisense lncRNA gene Chr6:86876441-86934604 (+)
BALB/cJ MGP_BALBcJ_G0004272
antisense lncRNA gene Chr6:84442768-84499709 (+)
C3H/HeJ MGP_C3HHeJ_G0004233
antisense lncRNA gene Chr6:97534987-97590729 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004421
antisense lncRNA gene Chr6:90204115-90264420 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003892
antisense lncRNA gene Chr6:82605501-82668546 (+)
CAST/EiJ MGP_CASTEiJ_G0004182
antisense lncRNA gene Chr6:86946127-87001217 (+)
CBA/J MGP_CBAJ_G0004214
antisense lncRNA gene Chr6:93752889-93812807 (+)
DBA/2J MGP_DBA2J_G0004230
antisense lncRNA gene Chr6:83746290-83803705 (+)
FVB/NJ MGP_FVBNJ_G0004246
antisense lncRNA gene Chr6:82931184-82987501 (+)
LP/J MGP_LPJ_G0004309
antisense lncRNA gene Chr6:87857174-87916114 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004237
antisense lncRNA gene Chr6:97869626-97930391 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004419
antisense lncRNA gene Chr6:86715796-86773077 (+)
PWK/PhJ MGP_PWKPhJ_G0004135
antisense lncRNA gene Chr6:82690406-82746968 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004078
antisense lncRNA gene Chr6:85555746-85613168 (+)
WSB/EiJ MGP_WSBEiJ_G0004219
antisense lncRNA gene Chr6:87173241-87236444 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 72012 NCBI Gene Model | MGI Sequence Detail 37120 C57BL/6J ±  kb
transcript NR_037961 RefSeq | MGI Sequence Detail 610 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Phenotypes 11
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:255082 Kurogi S, et al., Development of an efficient screening system to identify novel bone metabolism-related genes using the exchangeable gene trap mutagenesis mouse models. Sci Rep. 2017 Jan 20;7:40692

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory