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Prr23a3 Gene Detail
Summary
  • Symbol
    Prr23a3
  • Name
    proline rich 23A, member 3
  • Synonyms
    2410012M07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919229
    NCBI Gene: 71979
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:98864767-98866580 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 51.41 cM, cytoband E4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919229
protein coding gene Chr9:98864767-98866583 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035160
protein coding gene Chr9:100185084-100186900 (+)
A/J MGP_AJ_G0035140
protein coding gene Chr9:96655433-96657248 (+)
AKR/J MGP_AKRJ_G0035073
protein coding gene Chr9:99023475-99025291 (+)
BALB/cJ MGP_BALBcJ_G0035132
protein coding gene Chr9:96334906-96336665 (+)
C3H/HeJ MGP_C3HHeJ_G0034844
protein coding gene Chr9:99398406-99401738 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035654
protein coding gene Chr9:103055246-103057062 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032551
protein coding gene Chr9:94421865-94423690 (+)
CAST/EiJ MGP_CASTEiJ_G0034153
protein coding gene Chr9:99215516-99217332 (+)
CBA/J MGP_CBAJ_G0034811
protein coding gene Chr9:106569144-106570959 (+)
DBA/2J MGP_DBA2J_G0034974
protein coding gene Chr9:96156715-96158530 (+)
FVB/NJ MGP_FVBNJ_G0034922
protein coding gene Chr9:94985333-94986998 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0034960
protein coding gene Chr9:108531179-108532994 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035676
protein coding gene Chr9:99232926-99234746 (+)
PWK/PhJ MGP_PWKPhJ_G0033860
protein coding gene Chr9:96373206-96375196 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033697
protein coding gene Chr9:99299715-99302063 (+)
WSB/EiJ MGP_WSBEiJ_G0034273
protein coding gene Chr9:99125523-99128169 (+)



Homology
more
  • Human Ortholog
    PRR23A, proline rich 23A
  • Vertebrate Orthologs
    14
  • Human Ortholog
    PRR23A, proline rich 23A
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 729627
    neXtProt AC: NX_A6NEV1
    UniProt: A6NEV1

  • Chr Location
    3q23; chr3:139003962-139006268 (-)  GRCh38.p7

  • Human Ortholog
    PRR23B, proline rich 23B
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 389151
    neXtProt AC: NX_Q6ZRT6
    UniProt: Q6ZRT6

  • Chr Location
    3q23; chr3:139019031-139020926 (-)  GRCh38.p7

  • Human Ortholog
    PRR23C, proline rich 23C
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 389152
    neXtProt AC: NX_Q6ZRP0
    UniProt: Q6ZRP0

  • Chr Location
    3q23; chr3:139042102-139044892 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71979 NCBI Gene Model | MGI Sequence Detail 1814 C57BL/6J ±  kb
transcript NM_028033 RefSeq | MGI Sequence Detail 1814 C57BL/6  
polypeptide Q9CWP9 UniProt | EBI | MGI Sequence Detail 254 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR018903 Proline-rich protein 23
Molecular
Reagents
less
  • All nucleic 6
    cDNA 5
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:210665 Shi F, et al., A piggyBac insertion disrupts Foxl2 expression that mimics BPES syndrome in mice. Hum Mol Genet. 2014 Jul 15;23(14):3792-800

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/09/2019
MGI 6.14
The Jackson Laboratory