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Zdhhc13
Gene Detail
 Symbol
Name
ID
Zdhhc13
zinc finger, DHHC domain containing 13
MGI:1919227
Synonyms 2410004E01Rik, Hip14l, kojak, skc4
Feature Type protein coding gene
Genetic Map
Chromosome 7
31.11 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:48789003-48827440 bp, + strand
From VEGA annotation of GRCm38

  38438 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:75106  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Zdhhc13

Human
homologs
Human Homolog ZDHHC13, zinc finger, DHHC-type containing 13
NCBI Gene ID 54503
neXtProt AC  NX_Q8IUH4
Human Synonyms  HIP14L, HIP3RP
Human Chr (Location)  11p15.1; chr11:19117145-19176420 (+)  GRCh38
Alleles
and
phenotypes
All alleles(4) : Targeted(1) Gene trapped(2) Chemically induced(1)
 
Mice homozygous for an ENU mutation display wasting, weight loss, hair loss (alopecia), reduced bone mineral density (osteoporosis), and generalized amyloid deposition, which resulted in early death.
 
Human Diseases Modeled Using Mouse Zdhhc13 (1)    Alleles Annotated to Human Diseases(1)    Phenotype Images(6)
Gene Ontology
(GO)
classifications
All GO classifications: (21 annotations)
Process ion transmembrane transport, ion transport, ...
Component cytoplasmic vesicle, endoplasmic reticulum, ...
Function magnesium ion transmembrane transporter activity, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (73)    Tissues (39)    Images (18)
Theiler Stages: 2, 3, 4, 5, 15, 17, 19, 22, 23, 28
Assay TypeResults
RNA in situ 58
RT-PCR 15
cDNA source data(36)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(37) cDNA(36) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000030356 (Evidence)
Ensembl Gene ModelENSMUSG00000030471 (Evidence)
Entrez Gene243983 (Evidence)
UniGene279116
DFCITC1577674
DoTSDT.101282115, DT.481138
NIA Mouse Gene IndexU008121
EC2.3.1.225
Consensus CDS ProjectCCDS52259.1
International Mouse Knockout Project StatusZdhhc13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030356 VEGA Gene Model | MGI Sequence Detail 38438 C57BL/6J ±  kb
transcript OTTMUST00000075207 VEGA | MGI Sequence Detail 2410 Not Applicable 
polypeptide OTTMUSP00000039367 VEGA | MGI Sequence Detail 622 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(8) UniProt(2)
Polymorphisms SNPs within 2kb(320 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR001594 Zinc finger, DHHC-type, palmitoyltransferase
Protein Ontology PR:000031756 palmitoyltransferase ZDHHC13
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:191129 Sutton LM, et al., Hip14l-deficient mice develop neuropathological and behavioural features of Huntington disease. Hum Mol Genet. 2013 Feb 1;22(3):452-65
All references(40)
Other
accession IDs
MGI:2671602

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory