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Zdhhc13
Gene Detail
Symbol

Name
ID
Zdhhc13
zinc finger, DHHC domain containing 13
MGI:1919227
Synonyms
2410004E01Rik, Hip14l, kojak, skc4
Feature Type
protein coding gene
Genetic Map
Chromosome 7
31.11 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:48789003-48827440 bp, + strand
From VEGA annotation of GRCm38

  38438 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:75106  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: ZDHHC13
Gene Tree: Zdhhc13

Human
homologs
ZDHHC13, zinc finger, DHHC-type containing 13
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 54503
neXtProt AC: NX_Q8IUH4

Human Synonyms: HIP14L, HIP3RP

Human Chr (Location): 11p15.1; chr11:19117099-19176420 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Chemically induced (ENU)(1) Gene trapped(2) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for an ENU mutation display wasting, weight loss, hair loss (alopecia), reduced bone mineral density (osteoporosis), and generalized amyloid deposition, which resulted in early death.
 
Human Diseases Modeled in Mice Using Zdhhc13 (1)    Mutations Annotated to Human Diseases (1)    Phenotype Images(6)
Interactions
Zdhhc13 interacts with 124 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process cation transmembrane transport, magnesium ion transport, ...
Component cytoplasmic vesicle, endoplasmic reticulum, ...
Function magnesium ion transmembrane transporter activity, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (66)    Tissues (34)    Images (18)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 58
RT-PCR 8
cDNA source data(36)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase zdhhc13    NEW 
Molecular
reagents
All nucleic(37) cDNA(36) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000030356 (Evidence)
Ensembl Gene Model ENSMUSG00000030471 (Evidence)
Entrez Gene 243983 (Evidence)
UniGene 279116
DFCI TC1577674
DoTS DT.101282115, DT.481138
NIA Mouse Gene Index U008121
EC 2.3.1.225
Consensus CDS Project CCDS52259.1
International Mouse Phenotyping Consortium Status Zdhhc13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030356 VEGA Gene Model | MGI Sequence Detail 38438 C57BL/6J ±  kb
transcript OTTMUST00000075207 VEGA | MGI Sequence Detail 2410 Not Applicable 
polypeptide OTTMUSP00000039367 VEGA | MGI Sequence Detail 622 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(6) UniProt(2)
Polymorphisms
SNPs within 2kb(320 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR030290 Palmitoyltransferase ZDHHC13
InterPro IPR001594 Zinc finger, DHHC-type, palmitoyltransferase
Protein Ontology PR:000031756 palmitoyltransferase ZDHHC13
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:218852 Sanders SS, et al., Huntingtin interacting proteins 14 and 14-like are required for chorioallantoic fusion during early placental development. Dev Biol. 2015 Jan 15;397(2):257-66
All references(43)
Disease annotation references (1)
Other
accession IDs
MGI:2671602

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory