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Ift88os Gene Detail
Summary
  • Symbol
    Ift88os
  • Name
    intraflagellar transport 88, opposite strand
  • Synonyms
    2310043D23Rik
Location &
Maps
more
  • Sequence Map
    Chr14:57744201-57748292 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 30.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919181
 antisense lncRNA gene Chr14:57744201-57748292 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003254
 antisense lncRNA gene Chr14:51697586-51701677 (-)
A/J MGP_AJ_G0003230
 antisense lncRNA gene Chr14:50670934-50675025 (-)
AKR/J MGP_AKRJ_G0003213
 antisense lncRNA gene Chr14:52445683-52449774 (-)
BALB/cJ MGP_BALBcJ_G0003219
 antisense lncRNA gene Chr14:50617597-50621688 (-)
C3H/HeJ MGP_C3HHeJ_G0003172
 antisense lncRNA gene Chr14:52097428-52101519 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003361
 antisense lncRNA gene Chr14:54250246-54254337 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002885
 antisense lncRNA gene Chr14:48752274-48756520 (-)
CAST/EiJ MGP_CASTEiJ_G0003138
 antisense lncRNA gene Chr14:48430397-48434421 (-)
CBA/J MGP_CBAJ_G0003169
 antisense lncRNA gene Chr14:55857249-55861340 (-)
DBA/2J MGP_DBA2J_G0003174
 antisense lncRNA gene Chr14:50347708-50351799 (-)
FVB/NJ MGP_FVBNJ_G0003193
 antisense lncRNA gene Chr14:49735601-49739692 (-)
LP/J MGP_LPJ_G0003251
 antisense lncRNA gene Chr14:52740520-52744611 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003182
 antisense lncRNA gene Chr14:55211990-55216081 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003363
 antisense lncRNA gene Chr14:51602972-51607063 (-)
PWK/PhJ MGP_PWKPhJ_G0003096
 antisense lncRNA gene Chr14:46886072-46890163 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003042
 antisense lncRNA gene Chr14:47660954-47664994 (-)
WSB/EiJ MGP_WSBEiJ_G0003172
 antisense lncRNA gene Chr14:51917041-51921132 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086486 Ensembl Gene Model | MGI Sequence Detail 4092 C57BL/6J ±  kb
transcript ENSMUST00000149702 Ensembl | MGI Sequence Detail 2016 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory