Tube1
Gene Detail

Symbol Name ID

Tube1 epsilon-tubulin 1 MGI:1919174

Synonyms

2310061K05Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 10

20.16 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(4)

Sequence Map

Chr10:39134023-39151058 bp, + strand From NCBI annotation of GRCm38   17036 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:17762  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Tube1

Human homologs

Human Homolog		TUBE1, tubulin, epsilon 1
NCBI Gene ID		51175
neXtProt AC		NX_Q9UJT0
Human Synonyms		dJ142L7.2, TUBE
Human Chr (Location)		6q21; chr6:112391860-112408751 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(4) : Targeted(2) Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (14 annotations)

Process	centrosome organization, GTP catabolic process, ...
Component	cytoplasm, cytoskeleton, ...
Function	GTPase activity, GTP binding, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (55)    Tissues (30)    Images (20)
Theiler Stages: 19, 23, 28

Assay Type	Results
RNA in situ	55

cDNA source data(32)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(32) cDNA(32)
Microarray probesets(4)

Other database links

Ensembl Gene Model	ENSMUSG00000019845 (Evidence)
Entrez Gene	71924 (Evidence)
UniGene	297956
DFCI	TC1579355, TC1592538, TC1598070, TC1619988, TC1665141, TC1707024
DoTS	DT.487685, DT.91351462, DT.94164828, DT.94254470, DT.94361888
NIA Mouse Gene Index	U011408
Consensus CDS Project	CCDS23787.1
International Mouse Knockout Project Status	Tube1

Sequences

Length	Strain/Species
genomic	71924	NCBI Gene Model | MGI Sequence Detail	17036	C57BL/6J
transcript	NM_028006	RefSeq | MGI Sequence Detail	2929	C57BL/6
polypeptide	Q9D6T1	UniProt | EBI | MGI Sequence Detail	475	Not Applicable

All sequences(30) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(116 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR004057	Epsilon tubulin
InterPro	IPR000217	Tubulin
InterPro	IPR017975	Tubulin, conserved site
InterPro	IPR023123	Tubulin, C-terminal
InterPro	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain
InterPro	IPR008280	Tubulin/FtsZ, C-terminal
InterPro	IPR003008	Tubulin/FtsZ, GTPase domain
Protein Ontology	PR:000016824	tubulin epsilon chain

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)

Other accession IDs

MGI:2143644