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Borcs6 Gene Detail
Summary
  • Symbol
    Borcs6
  • Name
    BLOC-1 related complex subunit 6
  • Synonyms
    2310047M10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919173
    NCBI Gene: 71923
  • Alliance
    gene page
Location & Maps
more
  • Sequence Map
    Chr11:69059717-69061578 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      1862 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 42.33 cM, cytoband B3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    BORCS6, BLOC-1 related complex subunit 6
  • Vertebrate Orthologs
    7
  • Human Ortholog
    BORCS6, BLOC-1 related complex subunit 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C17orf59, PRO2472
  • Links
    NCBI Gene ID: 54785
    neXtProt AC: NX_Q96GS4
    UniProt: Q96GS4

  • Chr Location
    17p13.1; chr17:8188333-8190246 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    32
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005958 VEGA Gene Model | MGI Sequence Detail 1862 C57BL/6J ±  kb
transcript OTTMUST00000013296 VEGA | MGI Sequence Detail 1862 Not Applicable  
polypeptide OTTMUSP00000006159 VEGA | MGI Sequence Detail 360 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    27 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR019314 BLOC-1-related complex subunit 6
Molecular
Reagents
less
  • All nucleic 32
    cDNA 32

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:251831 Kalin S, et al., A Stat6/Pten Axis Links Regulatory T Cells with Adipose Tissue Function. Cell Metab. 2017 Sep 5;26(3):475-492.e7
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/15/2018
MGI 6.12 		The Jackson Laboratory