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Bdh1 Gene Detail
Summary
  • Symbol
    Bdh1
  • Name
    3-hydroxybutyrate dehydrogenase, type 1
  • Synonyms
    2310032J20Rik, Bdh
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919161
    NCBI Gene: 71911
  • Gene Overview
    MyGene.info: BDH1
Location & Maps
more
  • Sequence Map
    Chr16:31422280-31458901 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      36622 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 21.74 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    BDH1, 3-hydroxybutyrate dehydrogenase, type 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    BDH1, 3-hydroxybutyrate dehydrogenase, type 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BDH, SDR9C1
  • Links
    NCBI Gene ID: 622
    neXtProt AC: NX_Q02338

  • Chr Location
    3q29; chr3:197509783-197573323 (-)  GRCh38.p2
  • HomoloGene
    Vertebrate Homology Class 20860
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: BDH1
  • Gene Tree
    Bdh1
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    321
  • Tissues
    123
  • cDNA Data
    105
  • Literature Summary
    3
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026185 VEGA Gene Model | MGI Sequence Detail 36622 C57BL/6J ±  kb
transcript OTTMUST00000063794 VEGA | MGI Sequence Detail 1711 Not Applicable  
polypeptide OTTMUSP00000031602 VEGA | MGI Sequence Detail 343 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    296 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000004714 D-beta-hydroxybutyrate dehydrogenase, mitochondrial
  • EC
    1.1.1.30
  • InterPro Domains
    IPR016040 NAD(P)-binding domain
    IPR020904 Short-chain dehydrogenase/reductase, conserved site
    IPR002347 Short-chain dehydrogenase/reductase SDR
Molecular
Reagents
less
  • All nucleic 106
    cDNA 105
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2146421
References
more
  • Summaries
    All 40
    Developmental Gene Expression 3
    Gene Ontology 7
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:216177 Labialle S, et al., The miR-379/miR-410 cluster at the imprinted Dlk1-Dio3 domain controls neonatal metabolic adaptation. EMBO J. 2014 Oct 1;33(19):2216-30
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/27/2016
MGI 6.05 		The Jackson Laboratory