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Cldn23 Gene Detail
Summary
  • Symbol
    Cldn23
  • Name
    claudin 23
  • Synonyms
    2310014B08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919158
    NCBI Gene: 71908
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:35824712-35826559 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 21.21 cM, cytoband B1.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919158
protein coding gene Chr8:35824709-35826559 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033541
protein coding gene Chr8:34453916-34455768 (-)
A/J MGP_AJ_G0033521
protein coding gene Chr8:33094308-33096160 (-)
AKR/J MGP_AKRJ_G0033445
protein coding gene Chr8:34118533-34120385 (-)
BALB/cJ MGP_BALBcJ_G0033517
protein coding gene Chr8:33205551-33207403 (-)
C3H/HeJ MGP_C3HHeJ_G0033229
protein coding gene Chr8:34460876-34462728 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034033
protein coding gene Chr8:35745929-35747779 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030982
protein coding gene Chr8:30041843-30043695 (-)
CAST/EiJ MGP_CASTEiJ_G0032556
protein coding gene Chr8:33939733-33941589 (-)
CBA/J MGP_CBAJ_G0033207
protein coding gene Chr8:37145123-37146975 (-)
DBA/2J MGP_DBA2J_G0033360
protein coding gene Chr8:33020963-33022815 (-)
FVB/NJ MGP_FVBNJ_G0033305
protein coding gene Chr8:32684286-32686138 (-)
LP/J MGP_LPJ_G0033450
protein coding gene Chr8:34412451-34414303 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033347
protein coding gene Chr8:36588192-36590044 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034052
protein coding gene Chr8:34242206-34244058 (-)
PWK/PhJ MGP_PWKPhJ_G0032266
protein coding gene Chr8:32579535-32581384 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032098
protein coding gene Chr8:33501016-33502864 (-)
WSB/EiJ MGP_WSBEiJ_G0032672
protein coding gene Chr8:34434019-34435871 (-)



Homology
more
  • Human Ortholog
    CLDN23, claudin 23
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CLDN23, claudin 23
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CLDNL, hCG1646163
  • Links
    NCBI Gene ID: 137075
    neXtProt AC: NX_Q96B33
    UniProt: Q96B33

  • Chr Location
    8p23.1; chr8:8702156-8704107 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055976 Ensembl Gene Model | MGI Sequence Detail 1848 C57BL/6J ±  kb
transcript ENSMUST00000060128 Ensembl | MGI Sequence Detail 1848 Not Applicable  
polypeptide ENSMUSP00000049725 Ensembl | MGI Sequence Detail 296 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:240059 Park KC, et al., Skin-Specific Deletion of Mis18alpha Impedes Proliferation and Stratification of Epidermal Keratinocytes. J Invest Dermatol. 2017 Feb;137(2):414-421

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory