About   Help   FAQ
Coq2
Gene Detail
Symbol

Name
ID
Coq2
coenzyme Q2 homolog, prenyltransferase (yeast)
MGI:1919133
Synonyms
2310002F18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
48.50 cM, cytoband E3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:100654723-100675140 bp, - strand
From VEGA annotation of GRCm38

  20418 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:69192  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: COQ2
Gene Tree: Coq2

Human
homologs
COQ2, coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 27235
neXtProt AC: NX_Q96H96

Human Synonyms: CL640, COQ10D1, MSA1, PHB:PPT

Human Chr (Location): 4q21.23; chr4:83138601-83285089 (-)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human COQ2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Coq2 interacts with 102 markers (Mir15a, Mir23a, Mir23b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(59)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase LOC100486844    NEW 
Molecular
reagents
All nucleic(59) cDNA(59)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000026156 (Evidence)
Ensembl Gene Model ENSMUSG00000029319 (Evidence)
Entrez Gene 71883 (Evidence)
UniGene 260661
DFCI TC1578087
DoTS DT.532308, DT.110471165, DT.101718320
NIA Mouse Gene Index U026454, U234685
EC 2.5.1.39
Consensus CDS Project CCDS19465.1
International Mouse Phenotyping Consortium Status Coq2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026156 VEGA Gene Model | MGI Sequence Detail 20418 C57BL/6J ±  kb
transcript OTTMUST00000064609 VEGA | MGI Sequence Detail 1743 Not Applicable 
polypeptide OTTMUSP00000032111 VEGA | MGI Sequence Detail 374 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(7) UniProt(5)
Polymorphisms
SNPs within 2kb(263 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006370 4-hydroxybenzoate polyprenyl transferase
InterPro IPR000537 UbiA prenyltransferase family
Protein Ontology PR:000005751 4-hydroxybenzoate polyprenyltransferase, mitochondrial
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:176132 O'Leary J, et al., Global analysis of gene expression in the developing brain of gtf2ird1 knockout mice. PLoS One. 2011;6(8):e23868
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/20/2015
MGI 5.22
The Jackson Laboratory