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Slc17a9 Gene Detail
Summary
  • Symbol
    Slc17a9
  • Name
    solute carrier family 17, member 9
  • Synonyms
    1700019H03Rik, MGC:28538, Vnut
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919107
    NCBI Gene: 228993
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr2:180725263-180742280 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      17018 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 103.28 cM, cytoband H4
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SLC17A9, solute carrier family 17 member 9
  • Vertebrate Orthologs
    11
  • Human Ortholog
    SLC17A9, solute carrier family 17 member 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf59, POROK8, VNUT
  • Links
    NCBI Gene ID: 63910
    neXtProt AC: NX_Q9BYT1
    UniProt: Q9BYT1

  • Chr Location
    20q13.33; chr20:62952647-62968597 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    14 phenotypes from 3 alleles in 3 genetic backgrounds
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous knockout affects the neuroendocrine system, resulting in hypoglycemia, increased glucose tolerance and increased insulin sensitivity.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000016390 VEGA Gene Model | MGI Sequence Detail 17018 C57BL/6J ±  kb
    transcript OTTMUST00000039473 VEGA | MGI Sequence Detail 2275 Not Applicable  
    polypeptide OTTMUSP00000017636 VEGA | MGI Sequence Detail 447 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      61 from dbSNP Build 142
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 30
      cDNA 30

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2670971
    References
    more
    • Summaries
      All 41
      Developmental Gene Expression 2
      Gene Ontology 3
      Phenotypes 14
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:246118 Ihara T, et al., Clock Genes Regulate the Circadian Expression of Piezo1, TRPV4, Connexin26, and VNUT in an Ex Vivo Mouse Bladder Mucosa. PLoS One. 2017;12(1):e0168234

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    05/15/2018
    MGI 6.12
    The Jackson Laboratory