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1700008I05Rik
Gene Detail
Symbol

Name
ID
1700008I05Rik
RIKEN cDNA 1700008I05 gene
MGI:1919091
Synonyms
Tcp11l3
Feature Type
protein coding gene
Genetic Map
Chromosome X
57.26 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:135654698-135693790 bp, - strand
From VEGA annotation of GRCm38

  39093 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:122220  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: 1700008I05Rik

Human
homologs
Human Homolog TCP11X2, t-complex 11 family, X-linked 2
NCBI Gene ID 100996648
neXtProt AC  NX_Q5H9J9
Human Chr (Location)  chrX:102460319-102471812 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Genomic Mutations involving 1700008I05Rik (1)
Interactions
1700008I05Rik interacts with 76 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(6)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000018757 (Evidence)
Ensembl Gene ModelENSMUSG00000058252 (Evidence)
Entrez Gene71841 (Evidence)
UniGene371643
DFCITC1589162, TC1690881
DoTSDT.91394406, DT.55134995
NIA Mouse Gene IndexU039713
Consensus CDS ProjectCCDS41129.1
International Mouse Knockout Project Status1700008I05Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018757 VEGA Gene Model | MGI Sequence Detail 39093 C57BL/6J ±  kb
transcript OTTMUST00000045117 VEGA | MGI Sequence Detail 1776 Not Applicable 
polypeptide OTTMUSP00000020279 VEGA | MGI Sequence Detail 503 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(80 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008862 T-complex 11
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:199138 Zhou J, et al., A 1.1-Mb segmental deletion on the X chromosome causes meiotic failure in male mice. Biol Reprod. 2013 Jun;88(6):159
All references(25)
Other
accession IDs
MGI:2148048

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory