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1700003E16Rik
Gene Detail
Symbol

Name
ID
1700003E16Rik
RIKEN cDNA 1700003E16 gene
MGI:1919087
Feature Type
protein coding gene
Genetic Map
Chromosome 6
35.94 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:83156404-83162975 bp, + strand
From NCBI annotation of GRCm38

  6572 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:52846  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: C2orf81
Gene Tree: 1700003E16Rik

Human
homologs
C2orf81, chromosome 2 open reading frame 81
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 388963
neXtProt AC: NX_A6NN90

Human Synonyms: hCG40743

Human Chr (Location): 2p13.1; chr2:74414176-74417717 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Spontaneous(1) Targeted(1)
Genomic Mutations involving 1700003E16Rik (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
1700003E16Rik interacts with 10 markers (Mir183, Mir767, Mir3074-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (37)    Tissues (4)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 37
cDNA source data(32)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(32) cDNA(32)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000030030 (Evidence)
Entrez Gene 71837 (Evidence)
UniGene 17621
DFCI TC1634112, TC1581063
DoTS DT.60118420, DT.101378588
NIA Mouse Gene Index U007079
Consensus CDS Project CCDS51818.1
International Mouse Phenotyping Consortium Status 1700003E16Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 71837 NCBI Gene Model | MGI Sequence Detail 6572 C57BL/6J ±  kb
transcript NM_027948 RefSeq | MGI Sequence Detail 2050 C57BL/6 
polypeptide Q9DAQ4 UniProt | EBI | MGI Sequence Detail 598 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(32 from dbSNP Build 137)
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(21)
Other
accession IDs
MGI:2141588

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory