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1700006A11Rik Gene Detail
Summary
  • Symbol
    1700006A11Rik
  • Name
    RIKEN cDNA 1700006A11 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919074
    NCBI Gene: 71824
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:124400984-124426028 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 54.68 cM, cytoband H1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    321 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919074
protein coding gene Chr3:124400984-124426040 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027853
protein coding gene Chr3:126738446-126763628 (-)
A/J MGP_AJ_G0027812
protein coding gene Chr3:122433860-122460648 (-)
AKR/J MGP_AKRJ_G0027777
protein coding gene Chr3:125613712-125638764 (-)
BALB/cJ MGP_BALBcJ_G0027824
protein coding gene Chr3:122252934-122280128 (-)
C3H/HeJ MGP_C3HHeJ_G0027554
protein coding gene Chr3:125958006-125984321 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028269
protein coding gene Chr3:131320808-131345863 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025606
protein coding gene Chr3:117808612-117833560 (-)
CAST/EiJ MGP_CASTEiJ_G0027009
protein coding gene Chr3:125407416-125433612 (-)
CBA/J MGP_CBAJ_G0027529
protein coding gene Chr3:135722900-135753677 (-)
DBA/2J MGP_DBA2J_G0027670
protein coding gene Chr3:121629525-121654599 (-)
FVB/NJ MGP_FVBNJ_G0027638
protein coding gene Chr3:119247574-119272634 (-)
LP/J MGP_LPJ_G0027780
protein coding gene Chr3:128286643-128311774 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027668
protein coding gene Chr3:143367323-143392769 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028325
protein coding gene Chr3:125189460-125214505 (-)
PWK/PhJ MGP_PWKPhJ_G0026735
protein coding gene Chr3:121333690-121359280 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026559
protein coding gene Chr3:123258434-123283547 (-)
WSB/EiJ MGP_WSBEiJ_G0027089
protein coding gene Chr3:125911485-125936501 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71824 NCBI Gene Model | MGI Sequence Detail 25045 C57BL/6J ±  kb
transcript NM_027939 RefSeq | MGI Sequence Detail 2159 C57BL/6  
polypeptide NP_082215 RefSeq | MGI Sequence Detail 544 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR000198 Rho GTPase-activating protein domain
    IPR008936 Rho GTPase activation protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Diseases 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:261319 Huang GH, et al., Rho GTPase-activating proteins: Regulators of Rho GTPase activity in neuronal development and CNS diseases. Mol Cell Neurosci. 2017 Apr;80:18-31

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory