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3200001D21Rik Gene Detail
Summary
  • Symbol
    3200001D21Rik
  • Name
    RIKEN cDNA 3200001D21 gene
Location &
Maps
more
  • Sequence Map
    Chr12:88332084-88344093 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, cytoband E
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    497 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919068
 lncRNA gene Chr12:88332084-88344093 (-)
129S1/SvImJ ENSMUSG00200051034
 lncRNA gene Chr12:80095673-80107405 (-)
A/J ENSMUSG00195035340
 lncRNA gene Chr12:82755080-82766808 (-)
AKR/J ENSMUSG00220049774
 lncRNA gene Chr12:80412090-80423822 (-)
BALB/cJ ENSMUSG00180016478
 lncRNA gene Chr12:81903611-81915608 (-)
C3H/HeJ ENSMUSG00175039349
 lncRNA gene Chr12:84522965-84534707 (-)
C57BL/6NJ ENSMUSG00215046747
 lncRNA gene Chr12:81100884-81112893 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005033090
 lncRNA gene Chr12:80972870-80984762 (-)
CBA/J ENSMUSG00210019080
 lncRNA gene Chr12:81498579-81510303 (-)
DBA/2J ENSMUSG00185003035
 lncRNA gene Chr12:83350435-83362167 (-)
FVB/NJ ENSMUSG00205044260
 lncRNA gene Chr12:80711984-80723720 (-)
JF1/MsJ ENSUMUG00000052326
 lncRNA gene Chr12:88027227-88039042 (-)
LP/J ENSMUSG00230047495
 lncRNA gene Chr12:90412510-90424238 (-)
NOD/ShiLtJ ENSMUSG00190040049
 lncRNA gene Chr12:104636089-104647802 (+)
NZO/HlLtJ ENSMUSG00225053085
 lncRNA gene Chr12:92196522-92208536 (-)
PWK/PhJ ENSLUMG00010003507
 lncRNA gene Chr12:81512328-81529158 (-)
SPRET/EiJ ENSMSPG00010001137
 lncRNA gene Chr12:83851716-83863782 (-)
WSB/EiJ ENSIUOG00005047075
 lncRNA gene Chr12:80730296-80742031 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 71818 NCBI Gene Model | MGI Sequence Detail 12010 C57BL/6J ±  kb
transcript NR_045888 RefSeq | MGI Sequence Detail 2283 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory