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1300017J02Rik
Gene Detail
Symbol

Name
ID
1300017J02Rik
RIKEN cDNA 1300017J02 gene
MGI:1919025
Synonyms
mICA
Feature Type
protein coding gene
Genetic Map
Chromosome 9
55.10 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:103250521-103305082 bp, - strand
From VEGA annotation of GRCm38

  54562 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:826  Vertebrate Homology Class
1 mouse; 1 rat; 1 cattle; 1 dog

Protein SuperFamily: transferrin
Gene Tree: 1300017J02Rik

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(4) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
1300017J02Rik interacts with 34 markers (Mir30b, Mir181b-1, Mir203, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process cellular iron ion homeostasis, iron ion transport, ...
Component extracellular region
Function enzyme inhibitor activity, ferric iron binding
External Resources: FuncBase
Expression
cDNA source data(46)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(46) cDNA(46)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000033542 (Evidence)
Ensembl Gene ModelENSMUSG00000033688 (Evidence)
Entrez Gene71775 (Evidence)
UniGene18802
DFCITC1579000, TC1615615
DoTSDT.101706261, DT.491524
NIA Mouse Gene IndexU031258
PDB3MC2
Consensus CDS ProjectCCDS23452.1
International Mouse Knockout Project Status1300017J02Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033542 VEGA Gene Model | MGI Sequence Detail 54562 C57BL/6J ±  kb
transcript OTTMUST00000084440 VEGA | MGI Sequence Detail 2284 Not Applicable 
polypeptide OTTMUSP00000045513 VEGA | MGI Sequence Detail 700 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(228 from dbSNP Build 137)    SNPs within 2kb including multiple locations(262)
Protein-related
information
ResourceIDDescription
InterPro IPR016357 Transferrin
InterPro IPR001156 Transferrin family
InterPro IPR018195 Transferrin family, iron binding site
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory