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Selenoo Gene Detail
Summary
  • Symbol
    Selenoo
  • Name
    selenoprotein O
  • Synonyms
    1300018J18Rik, Selo
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919007
    NCBI Gene: 223776
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:89089107-89100340 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 44.60 cM, cytoband E3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919007
protein coding gene Chr15:89089084-89100340 (.)
129S1/SvImJ MGP_129S1SvImJ_G0022216
protein coding gene Chr15:90254901-90266131 (+)
A/J MGP_AJ_G0022175
protein coding gene Chr15:86806617-86817878 (+)
AKR/J MGP_AKRJ_G0022150
protein coding gene Chr15:89377622-89390087 (+)
BALB/cJ MGP_BALBcJ_G0022181
protein coding gene Chr15:86909998-86922030 (+)
C3H/HeJ MGP_C3HHeJ_G0021951
protein coding gene Chr15:89364716-89375971 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022626
protein coding gene Chr15:93541880-93553168 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020151
protein coding gene Chr15:83034607-83046481 (+)
CAST/EiJ MGP_CASTEiJ_G0021473
protein coding gene Chr15:90143616-90156557 (+)
CBA/J MGP_CBAJ_G0021918
protein coding gene Chr15:96700129-96716906 (+)
DBA/2J MGP_DBA2J_G0022045
protein coding gene Chr15:86264454-86275759 (+)
FVB/NJ MGP_FVBNJ_G0022024
protein coding gene Chr15:85328456-85339702 (+)
LP/J MGP_LPJ_G0022116
protein coding gene Chr15:90422384-90433608 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022044
protein coding gene Chr15:101122785-101133949 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022641
protein coding gene Chr15:89412098-89423199 (+)
PWK/PhJ MGP_PWKPhJ_G0021214
protein coding gene Chr15:86308348-86319706 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021048
protein coding gene Chr15:89147062-89158259 (+)
WSB/EiJ MGP_WSBEiJ_G0021522
protein coding gene Chr15:89896647-89909263 (+)



Homology
more
  • Human Ortholog
    SELENOO, selenoprotein O
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SELENOO, selenoprotein O
    Orthology source: HomoloGene
  • Synonyms
    SELO
  • Links
    NCBI Gene ID: 83642
    neXtProt AC: NX_Q9BVL4
    UniProt: Q9BVL4

  • Chr Location
    22q13.33; chr22:50200979-50217616 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 223776 NCBI Gene Model | MGI Sequence Detail 11234 C57BL/6J ±  kb
transcript NM_027905 RefSeq | MGI Sequence Detail 2446 C57BL/6  
polypeptide Q9DBC0 UniProt | EBI | MGI Sequence Detail 667 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 6
References
more
  • Summaries
    All 42
    Diseases 1
    Gene Ontology 1
    Phenotypes 21
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:235561 Gladyshev VN, et al., Selenoprotein Gene Nomenclature. J Biol Chem. 2016 Nov 11;291(46):24036-24040

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory