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Gtf3c2 Gene Detail
Summary
  • Symbol
    Gtf3c2
  • Name
    general transcription factor IIIC, polypeptide 2, beta
  • Synonyms
    1300004C11Rik, 2610510G03Rik, mKIAA0011, TFIIIC110, TFIIIC-BETA
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919002
    NCBI Gene: 71752
Location & Maps
more
  • Sequence Map
    Chr5:31156005-31180144 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24140 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    GTF3C2, general transcription factor IIIC subunit 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GTF3C2, general transcription factor IIIC subunit 2
    Orthology source: HomoloGene
  • Synonyms
    TFIIIC110, TFIIIC-BETA
  • Links
    NCBI Gene ID: 2976
    neXtProt AC: NX_Q8WUA4

  • Chr Location
    2p23.3; chr2:27325849-27357034 (-)  GRCh38.p2

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    21 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Radiation induced
    3
  • Spontaneous
    1
  • Genomic Mutations
    6 involving Gtf3c2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022465 VEGA Gene Model | MGI Sequence Detail 24140 C57BL/6J ±  kb
transcript OTTMUST00000053732 VEGA | MGI Sequence Detail 4200 Not Applicable  
polypeptide OTTMUSP00000025564 VEGA | MGI Sequence Detail 950 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    79 from dbSNP Build 137
Molecular
Reagents
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  • All nucleic 239
    cDNA 238
    Primer pair 1

    Microarray probesets 10
Other
Accession IDs
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MGI:1914747, MGI:2140819, MGI:2141080
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 1
    Phenotypes 21
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
02/02/2016
MGI 6.02
The Jackson Laboratory