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Adh6-ps1 Pseudogene Detail
Summary
  • Symbol
    Adh6-ps1
  • Name
    alcohol dehydrogenase 6 (class V), pseudogene 1
  • Synonyms
    1300002P07Rik, Adh5ps
  • Feature Type
    pseudogene
  • IDs
    MGI:1918999
    NCBI Gene: 639769
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:138374121-138388291 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 64.22 cM, cytoband H2
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    251 from dbSNP Build 142
  • Strain Annotations
    5
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918999
pseudogene Chr3:138374121-138395002 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040364
pseudogene Chr3:146301925-146319977 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036971
pseudogene Chr3:131833102-131854076 (+)
CAST/EiJ MGP_CASTEiJ_G0038562
pseudogene Chr3:140154689-140163949 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0037986
pseudogene Chr3:137695650-137714311 (+)
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Adh6-ps1
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 639769 NCBI Gene Model | MGI Sequence Detail 14171 C57BL/6J ±  kb
transcript NR_033581 RefSeq | MGI Sequence Detail 2789 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:3779711
References
more
  • Summaries
    All 16
    Diseases 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory