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Fam13c Gene Detail
Summary
  • Symbol
    Fam13c
  • Name
    family with sequence similarity 13, member C
  • Synonyms
    1200015N20Rik, C030038O19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918971
    NCBI Gene: 71721
  • Gene Overview
    MyGene.info: FAM13C
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:70440481-70558736 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 36.68 cM, cytoband B5.2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    967 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918971
protein coding gene Chr10:70440084-70558736 (.)
129S1/SvImJ MGP_129S1SvImJ_G0017338
protein coding gene Chr10:70381500-70502845 (+)
A/J MGP_AJ_G0017315
protein coding gene Chr10:67985966-68104993 (+)
AKR/J MGP_AKRJ_G0017276
protein coding gene Chr10:69844002-69960195 (+)
BALB/cJ MGP_BALBcJ_G0017275
protein coding gene Chr10:68187457-68303013 (+)
C3H/HeJ MGP_C3HHeJ_G0017099
protein coding gene Chr10:69856616-69987845 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017733
protein coding gene Chr10:72922206-73045334 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015423
protein coding gene Chr10:64600481-64712622 (+)
CAST/EiJ MGP_CASTEiJ_G0016669
protein coding gene Chr10:70009592-70133375 (+)
CBA/J MGP_CBAJ_G0017071
protein coding gene Chr10:75736755-75871976 (+)
DBA/2J MGP_DBA2J_G0017176
protein coding gene Chr10:67337184-67454547 (+)
FVB/NJ MGP_FVBNJ_G0017169
protein coding gene Chr10:66515771-66630916 (+)
LP/J MGP_LPJ_G0017249
protein coding gene Chr10:70842613-70966654 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017197
protein coding gene Chr10:77824385-77954233 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017772
protein coding gene Chr10:69793884-69915361 (+)
PWK/PhJ MGP_PWKPhJ_G0016453
protein coding gene Chr10:67195801-67317936 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016235
protein coding gene Chr10:69177558-69301975 (+)
WSB/EiJ MGP_WSBEiJ_G0016733
protein coding gene Chr10:69733316-69874086 (+)



Homology
more
  • Human Ortholog
    FAM13C, family with sequence similarity 13 member C
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FAM13C, family with sequence similarity 13 member C
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FAM13C1
  • Links
    NCBI Gene ID: 220965
    neXtProt AC: NX_Q8NE31
    UniProt: Q8NE31

  • Chr Location
    10q21.1; chr10:59245933-59363186 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11490
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: FAM13C
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043259 Ensembl Gene Model | MGI Sequence Detail 118256 C57BL/6J ±  kb
transcript ENSMUST00000062883 Ensembl | MGI Sequence Detail 3262 Not Applicable  
polypeptide ENSMUSP00000051375 Ensembl | MGI Sequence Detail 601 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR039102 Protein FAM13
Molecular
Reagents
less
  • All nucleic 36
    Genomic 1
    cDNA 35

    Microarray probesets 5
Other
Accession IDs
less
MGI:1924739
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Phenotypes 12
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory