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Armcx3
Gene Detail
Symbol

Name
ID
Armcx3
armadillo repeat containing, X-linked 3
MGI:1918953
Synonyms
1200004E24Rik
Feature Type
protein coding gene
Genetic Map
Chromosome X
56.25 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:134756595-134761455 bp, + strand
From VEGA annotation of GRCm38

  4861 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9588  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: ARMCX3
Gene Tree: Armcx3

Human
homologs
ARMCX3, armadillo repeat containing, X-linked 3
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 51566
neXtProt AC: NX_Q9UH62

Human Synonyms: ALEX3, dJ545K15.2, GASP6

Human Chr (Location): Xq22.1; chrX:101623127-101627843 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
Armcx3 interacts with 245 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (39)    Tissues (8)    Images (20)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 39
cDNA source data(53)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(54) cDNA(53) Primer pair(1)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000019455 (Evidence)
Ensembl Gene Model ENSMUSG00000049047 (Evidence)
Entrez Gene 71703 (Evidence)
UniGene 67949
DFCI TC1575342
DoTS DT.99857807, DT.489078
NIA Mouse Gene Index U044140, U029316, U163511
Consensus CDS Project CCDS30400.1
International Mouse Phenotyping Consortium Status Armcx3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019455 VEGA Gene Model | MGI Sequence Detail 4861 C57BL/6J ±  kb
transcript OTTMUST00000046461 VEGA | MGI Sequence Detail 3327 Not Applicable 
polypeptide OTTMUSP00000020977 VEGA | MGI Sequence Detail 379 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(32 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000225 Armadillo
InterPro IPR011989 Armadillo-like helical
InterPro IPR006911 Armadillo repeat-containing domain
InterPro IPR016024 Armadillo-type fold
Protein Ontology PR:000029283 armadillo repeat-containing X-linked protein 3
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:199138 Zhou J, et al., A 1.1-Mb segmental deletion on the X chromosome causes meiotic failure in male mice. Biol Reprod. 2013 Jun;88(6):159
All references(30)
Other
accession IDs
MGI:2147889

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory