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Colec11 Gene Detail
Summary
  • Symbol
    Colec11
  • Name
    collectin sub-family member 11
  • Synonyms
    1010001H16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918943
    NCBI Gene: 71693
Location & Maps
more
  • Sequence Map
    Chr12:28594173-28623290 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      29118 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 10.98 cM, cytoband B1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    COLEC11, collectin subfamily member 11
  • Vertebrate Orthologs
    10
  • Human Ortholog
    COLEC11, collectin subfamily member 11
    Orthology source: HomoloGene
  • Synonyms
    3MC2, CLK1, CL-K1-I, CL-K1-II, CL-K1-IIa, CL-K1-IIb
  • Links
    NCBI Gene ID: 78989
    neXtProt AC: NX_Q9BWP8

  • Chr Location
    2p25.3; chr2:3594832-3644644 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human COLEC11 associations

Human Disease Mouse Models
       3mc Syndrome 2; 3MC2   OMIM: 265050
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036655 Ensembl Gene Model | MGI Sequence Detail 29118 C57BL/6J ±  kb
transcript ENSMUST00000036136 Ensembl | MGI Sequence Detail 1383 Not Applicable  
polypeptide ENSMUSP00000049285 Ensembl | MGI Sequence Detail 272 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    457 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:226926 Troegeler A, et al., Collectin CL-LK Is a Novel Soluble Pattern Recognition Receptor for Mycobacterium tuberculosis. PLoS One. 2015;10(7):e0132692

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory