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Tmem248 Gene Detail
Summary
  • Symbol
    Tmem248
  • Name
    transmembrane protein 248
  • Synonyms
    0610007L01Rik, A930023A16Rik, G430067H08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918917
    NCBI Gene: 71667
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:130219744-130243765 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 68.91 cM, cytoband F
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918917
protein coding gene Chr5:130217081-130243765 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030143
protein coding gene Chr5:134337230-134366350 (+)
A/J MGP_AJ_G0030111
protein coding gene Chr5:128673911-128701412 (+)
AKR/J MGP_AKRJ_G0030044
protein coding gene Chr5:132847665-132876646 (+)
BALB/cJ MGP_BALBcJ_G0030121
protein coding gene Chr5:130031498-130058481 (+)
C3H/HeJ MGP_C3HHeJ_G0029837
protein coding gene Chr5:133417318-133445764 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030574
protein coding gene Chr5:139485350-139514889 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027799
protein coding gene Chr5:123054018-123080073 (+)
CAST/EiJ MGP_CASTEiJ_G0029247
protein coding gene Chr5:132737547-132765407 (+)
CBA/J MGP_CBAJ_G0029807
protein coding gene Chr5:144918134-144947197 (+)
DBA/2J MGP_DBA2J_G0029958
protein coding gene Chr5:128639139-128665900 (+)
FVB/NJ MGP_FVBNJ_G0029913
protein coding gene Chr5:127731049-127758300 (+)
LP/J MGP_LPJ_G0030046
protein coding gene Chr5:134855171-134882382 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029945
protein coding gene Chr5:148254629-148283516 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030614
protein coding gene Chr5:132549239-132576696 (+)
PWK/PhJ MGP_PWKPhJ_G0028961
protein coding gene Chr5:127579379-127606577 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028797
protein coding gene Chr5:130127155-130155577 (+)
WSB/EiJ MGP_WSBEiJ_G0029320
protein coding gene Chr5:133259406-133287800 (+)



Homology
more
  • Human Ortholog
    TMEM248, transmembrane protein 248
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TMEM248, transmembrane protein 248
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf42
  • Links
    NCBI Gene ID: 55069
    neXtProt AC: NX_Q9NWD8
    UniProt: Q9NWD8

  • Chr Location
    7q11.21; chr7:66921216-66958551 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotypes from 1 allele in 1 genetic background
    18 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 71667 NCBI Gene Model | MGI Sequence Detail 24022 C57BL/6J ±  kb
    transcript NM_027854 RefSeq | MGI Sequence Detail 3669 C57BL/6  
    polypeptide Q3TBN1 UniProt | EBI | MGI Sequence Detail 314 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 132
      cDNA 132

      Microarray probesets 8
    Other
    Accession IDs
    less
    MGI:1925210, MGI:2141241
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 2
      Gene Ontology 1
      Phenotypes 18
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:236757 West DB, et al., Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression. PLoS Genet. 2016 Feb;12(2):e1005691

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    03/13/2019
    MGI 6.13
    The Jackson Laboratory