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Obox1 Gene Detail
Summary
  • Symbol
    Obox1
  • Name
    oocyte specific homeobox 1
  • Synonyms
    7420700M11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918718
    NCBI Gene: 71468
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:15281182-15290771 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 8.50 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918718
protein coding gene Chr7:15122873-15290791 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031688
protein coding gene Chr7:13004616-13006368 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0031583
protein coding gene Chr7:12292006-12328476 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0031389
protein coding gene Chr7:13225926-13636960 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032132
protein coding gene Chr7:13321916-13583529 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0031504
protein coding gene Chr7:12876208-12878327 (+)
FVB/NJ MGP_FVBNJ_G0031460
protein coding gene Chr7:11846177-11848163 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0031495
protein coding gene Chr7:13278598-14328527 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0030837
protein coding gene Chr7:13308273-13309495 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 71468 NCBI Gene Model | MGI Sequence Detail 9590 C57BL/6J ±  kb
transcript NM_027802 RefSeq | MGI Sequence Detail 1217 C57BL/6  
polypeptide NP_082078 RefSeq | MGI Sequence Detail 204 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017970 Homeobox, conserved site
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
Molecular
Reagents
less
  • All nucleic 13
    cDNA 9
    Primer pair 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:2142117, MGI:2142148
References
more
  • Summaries
    All 26
    Developmental Gene Expression 9
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:306170 Wu L, et al., Oocyte-Specific Homeobox 1, Obox1, Facilitates Reprogramming by Promoting Mesenchymal-to-Epithelial Transition and Mitigating Cell Hyperproliferation. Stem Cell Reports. 2017 Nov 14;9(5):1692-1705

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/14/2021
MGI 6.17
The Jackson Laboratory