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Ankrd40 Gene Detail
Summary
  • Symbol
    Ankrd40
  • Name
    ankyrin repeat domain 40
  • Synonyms
    1110011C06Rik, 5530600A18Rik, Gcap15
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918702
    NCBI Gene: 71452
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:94328001-94341841 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 58.90 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918702
protein coding gene Chr11:94328001-94341847 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018954
protein coding gene Chr11:96401481-96416478 (+)
A/J MGP_AJ_G0018922
protein coding gene Chr11:92556490-92570172 (+)
AKR/J MGP_AKRJ_G0018892
protein coding gene Chr11:95434602-95448257 (+)
BALB/cJ MGP_BALBcJ_G0018895
protein coding gene Chr11:92999483-93020039 (+)
C3H/HeJ MGP_C3HHeJ_G0018709
protein coding gene Chr11:95518451-95533877 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019347
protein coding gene Chr11:99404041-99420149 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016978
protein coding gene Chr11:90053274-90068167 (+)
CAST/EiJ MGP_CASTEiJ_G0018264
protein coding gene Chr11:96221186-96241042 (+)
CBA/J MGP_CBAJ_G0018680
protein coding gene Chr11:103534120-103553787 (+)
DBA/2J MGP_DBA2J_G0018788
protein coding gene Chr11:92132235-92147257 (+)
FVB/NJ MGP_FVBNJ_G0018777
protein coding gene Chr11:91552150-91567354 (+)
LP/J MGP_LPJ_G0018858
protein coding gene Chr11:96949902-96967246 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018804
protein coding gene Chr11:103571529-103585456 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019387
protein coding gene Chr11:95657794-95672793 (+)
PWK/PhJ MGP_PWKPhJ_G0018034
protein coding gene Chr11:93060324-93074372 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017824
protein coding gene Chr11:95319024-95333831 (+)
WSB/EiJ MGP_WSBEiJ_G0018313
protein coding gene Chr11:95535836-95550365 (+)



Homology
more
  • Human Ortholog
    ANKRD40, ankyrin repeat domain 40
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ANKRD40, ankyrin repeat domain 40
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 91369
    neXtProt AC: NX_Q6AI12
    UniProt: Q6AI12

  • Chr Location
    17q21.33; chr17:50693190-50707909 (-)  GRCh38.p7

Human Diseases
less
  • Mutations/Alleles
    2 with disease annotations
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from multigenic genotypes
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020864 Ensembl Gene Model | MGI Sequence Detail 13841 C57BL/6J ±  kb
transcript ENSMUST00000107818 Ensembl | MGI Sequence Detail 3487 Not Applicable  
polypeptide ENSMUSP00000103448 Ensembl | MGI Sequence Detail 363 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-18682, MGI:101858, MGI:1915744
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Diseases 2
    Phenotypes 12
  • Earliest
    J:19885 Kambouris M, et al., Novel cDNA clones obtained by antibody screening of a mouse cerebellar cDNA expression library. Brain Res Mol Brain Res. 1994 Sep;25(3-4):183-91
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory