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Sft2d1 Gene Detail
Summary
  • Symbol
    Sft2d1
  • Name
    SFT2 domain containing 1
  • Synonyms
    5630401J11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918689
    NCBI Gene: 106489
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:8311103-8327442 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 4.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    172 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918689
protein coding gene Chr17:8311102-8327442 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023132
protein coding gene Chr17:5782346-5866657 (+)
A/J MGP_AJ_G0023100
protein coding gene Chr17:5811469-5893646 (+)
AKR/J MGP_AKRJ_G0023065
protein coding gene Chr17:5490036-5580227 (+)
BALB/cJ MGP_BALBcJ_G0023100
protein coding gene Chr17:5613680-5692419 (+)
C3H/HeJ MGP_C3HHeJ_G0022863
protein coding gene Chr17:5761276-5844354 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023544
protein coding gene Chr17:6059949-6158018 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021062
protein coding gene Chr17:8473599-8551707 (-)
CAST/EiJ MGP_CASTEiJ_G0022378
protein coding gene Chr17:5744058-5822828 (+)
CBA/J MGP_CBAJ_G0022835
protein coding gene Chr17:6269415-6356479 (+)
DBA/2J MGP_DBA2J_G0022968
protein coding gene Chr17:5479866-5559348 (+)
FVB/NJ MGP_FVBNJ_G0022937
protein coding gene Chr17:5405458-5488592 (+)
LP/J MGP_LPJ_G0023039
protein coding gene Chr17:5605924-5696439 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022958
protein coding gene Chr17:6015829-6100500 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023569
protein coding gene Chr17:5763269-5857048 (+)
PWK/PhJ MGP_PWKPhJ_G0022126
protein coding gene Chr17:5107714-5193578 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021955
protein coding gene Chr17:5037279-5117763 (+)
WSB/EiJ MGP_WSBEiJ_G0022434
protein coding gene Chr17:6071757-6158258 (+)



Homology
more
  • Human Ortholog
    SFT2D1, SFT2 domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SFT2D1, SFT2 domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf83, pRGR1
  • Links
    NCBI Gene ID: 113402
    neXtProt AC: NX_Q8WV19
    UniProt: Q8WV19

  • Chr Location
    6q27; chr6:166319728-166342606 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 106489 NCBI Gene Model | MGI Sequence Detail 16340 C57BL/6J ±  kb
transcript NM_001357890 RefSeq | MGI Sequence Detail 1100 C57BL/6  
polypeptide NP_598875 RefSeq | MGI Sequence Detail 159 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 68
    cDNA 68

    Microarray probesets 5
Other
Accession IDs
less
MGI:2146762
References
more
  • Summaries
    All 18
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory