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Sft2d1 Gene Detail
Summary
  • Symbol
    Sft2d1
  • Name
    SFT2 domain containing 1
  • Synonyms
    5630401J11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918689
    NCBI Gene: 106489
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:8529934-8546274 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 4.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    172 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918689
protein coding gene Chr17:8529920-8546274 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023132
protein coding gene Chr17:5782346-5866657 (+)
A/J MGP_AJ_G0023100
protein coding gene Chr17:5811469-5893646 (+)
AKR/J MGP_AKRJ_G0023065
protein coding gene Chr17:5490036-5580227 (+)
BALB/cJ MGP_BALBcJ_G0023100
protein coding gene Chr17:5613680-5692419 (+)
C3H/HeJ MGP_C3HHeJ_G0022863
protein coding gene Chr17:5761276-5844354 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023544
protein coding gene Chr17:6059949-6158018 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021062
protein coding gene Chr17:8473599-8551707 (-)
CAST/EiJ MGP_CASTEiJ_G0022378
protein coding gene Chr17:5744058-5822828 (+)
CBA/J MGP_CBAJ_G0022835
protein coding gene Chr17:6269415-6356479 (+)
DBA/2J MGP_DBA2J_G0022968
protein coding gene Chr17:5479866-5559348 (+)
FVB/NJ MGP_FVBNJ_G0022937
protein coding gene Chr17:5405458-5488592 (+)
LP/J MGP_LPJ_G0023039
protein coding gene Chr17:5605924-5696439 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022958
protein coding gene Chr17:6015829-6100500 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023569
protein coding gene Chr17:5763269-5857048 (+)
PWK/PhJ MGP_PWKPhJ_G0022126
protein coding gene Chr17:5107714-5193578 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021955
protein coding gene Chr17:5037279-5117763 (+)
WSB/EiJ MGP_WSBEiJ_G0022434
protein coding gene Chr17:6071757-6158258 (+)



Homology
more
  • Human Ortholog
    SFT2D1, SFT2 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SFT2D1, SFT2 domain containing 1
  • Synonyms
    C6orf83, pRGR1
  • Links
    NCBI Gene ID: 113402
    neXtProt AC: NX_Q8WV19
    UniProt: Q8WV19

  • Chr Location
    6q27; chr6:166319728-166342606 (-)  GRCh38.p7

Human Diseases
less
  • References
    5 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    309 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000073468 Ensembl Gene Model | MGI Sequence Detail 16341 C57BL/6J ±  kb
transcript ENSMUST00000154553 Ensembl | MGI Sequence Detail 1049 Not Applicable  
polypeptide ENSMUSP00000117294 Ensembl | MGI Sequence Detail 159 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 68
    cDNA 68

    Microarray probesets 5
Other
Accession IDs
less
MGI:2146762
References
more
  • Summaries
    All 329
    Diseases 5
    Phenotypes 309
  • Earliest
    J:30229 Davisson MT, et al., Segmental trisomy as a mouse model for Down syndrome. Prog Clin Biol Res. 1993;384:117-33
  • Latest
    J:330574 Fulton SL, et al., Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn mouse model of Down syndrome. Nat Commun. 2022 Oct 26;13(1):6384

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2022
MGI 6.22
The Jackson Laboratory