About   Help   FAQ
Gpatch8 Gene Detail
Summary
  • Symbol
    Gpatch8
  • Name
    G patch domain containing 8
  • Synonyms
    5430405G24Rik, ENSMUSG00000075516, Fbm1, Gpatc8, mKIAA0553
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918667
    NCBI Gene: 237943
  • Gene Overview
    MyGene.info: GPATCH8
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:102475911-102556192 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 66.31 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    190 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918667
protein coding gene Chr11:102475911-102556392 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019238
protein coding gene Chr11:105454176-105537833 (-)
A/J MGP_AJ_G0019206
protein coding gene Chr11:101003930-101087607 (-)
AKR/J MGP_AKRJ_G0019175
protein coding gene Chr11:104123232-104214441 (-)
BALB/cJ MGP_BALBcJ_G0019180
protein coding gene Chr11:101490407-101571660 (-)
C3H/HeJ MGP_C3HHeJ_G0018989
protein coding gene Chr11:104333481-104423538 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019629
protein coding gene Chr11:108742452-108832833 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017255
protein coding gene Chr11:98430284-98508693 (-)
CAST/EiJ MGP_CASTEiJ_G0018543
protein coding gene Chr11:105323147-105410650 (-)
CBA/J MGP_CBAJ_G0018958
protein coding gene Chr11:113231164-113320264 (-)
DBA/2J MGP_DBA2J_G0019070
protein coding gene Chr11:100522282-100602609 (-)
FVB/NJ MGP_FVBNJ_G0019060
protein coding gene Chr11:100052513-100139985 (-)
LP/J MGP_LPJ_G0019139
protein coding gene Chr11:105979646-106070963 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019091
protein coding gene Chr11:112730390-112811963 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019667
protein coding gene Chr11:104496461-104581402 (-)
PWK/PhJ MGP_PWKPhJ_G0018306
protein coding gene Chr11:101587314-101666892 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018098
protein coding gene Chr11:104248979-104335666 (-)
WSB/EiJ MGP_WSBEiJ_G0018592
protein coding gene Chr11:104491558-104576812 (-)



Homology
more
  • Human Ortholog
    GPATCH8, G-patch domain containing 8
  • Vertebrate Orthologs
    7
  • Human Ortholog
    GPATCH8, G-patch domain containing 8
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GPATC8, KIAA0553
  • Links
    NCBI Gene ID: 23131
    neXtProt AC: NX_Q9UKJ3
    UniProt: Q9UKJ3

  • Chr Location
    17q21.31; chr17:44395277-44503602 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 237943 NCBI Gene Model | MGI Sequence Detail 80282 C57BL/6J ±  kb
transcript NM_001159492 RefSeq | MGI Sequence Detail 6844 C57BL/6  
polypeptide A2A6A1 UniProt | EBI | MGI Sequence Detail 1505 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 104
    cDNA 104

    Microarray probesets 10
Other
Accession IDs
less
MGI:2144385, MGI:3642003, MGI:894666
References
more
  • Summaries
    All 42
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 14
  • Earliest
    J:41036 Kai N, et al., Molecular cloning of Fyn-associated molecules in the mouse central nervous system. J Neurosci Res. 1997 Jun 1;48(5):407-24
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/13/2018
MGI 6.13
The Jackson Laboratory