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5430427O19Rik Gene Detail
Summary
  • Symbol
    5430427O19Rik
  • Name
    RIKEN cDNA 5430427O19 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918648
    NCBI Gene: 71398
Location & Maps
more
  • Sequence Map
    ChrX:85870354-85891499 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      21146 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 39.39 cM, cytoband B
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CXorf21, chromosome X open reading frame 21
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CXorf21, chromosome X open reading frame 21
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 80231
    neXtProt AC: NX_Q9HAI6

  • Chr Location
    Xp21.2; chrX:30558824-30577916 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017917 VEGA Gene Model | MGI Sequence Detail 21146 C57BL/6J ±  kb
transcript OTTMUST00000043310 VEGA | MGI Sequence Detail 3754 Not Applicable  
polypeptide OTTMUSP00000019468 VEGA | MGI Sequence Detail 298 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    139 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027869 Protein of unknown function DUF4569
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory