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5430401F13Rik Gene Detail
Summary
  • Symbol
    5430401F13Rik
  • Name
    RIKEN cDNA 5430401F13 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918642
    NCBI Gene: 71392
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:131543762-131553757 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 63.44 cM, cytoband F3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918642
protein coding gene Chr6:131486400-131553763 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031370
protein coding gene Chr6:135506023-135511428 (+)
A/J MGP_AJ_G0031346
protein coding gene Chr6:130217668-130285703 (+)
AKR/J MGP_AKRJ_G0031274
protein coding gene Chr6:133961760-134044537 (+)
BALB/cJ MGP_BALBcJ_G0031353
protein coding gene Chr6:129841912-129846556 (+)
C3H/HeJ MGP_C3HHeJ_G0031076
protein coding gene Chr6:134052479-134112968 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0028948
protein coding gene Chr6:128471101-128589233 (+)
CAST/EiJ MGP_CASTEiJ_G0030447
protein coding gene Chr6:133971979-133985642 (+)
CBA/J MGP_CBAJ_G0031034
protein coding gene Chr6:144405098-144450830 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0031274
protein coding gene Chr6:135795386-135802316 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031180
protein coding gene Chr6:148242852-148256284 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031845
protein coding gene Chr6:133960064-133967629 (+)
PWK/PhJ MGP_PWKPhJ_G0030168
protein coding gene Chr6:127483142-127485397 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029995
protein coding gene Chr6:132097268-132214154 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71392 NCBI Gene Model | MGI Sequence Detail 9996 C57BL/6J ±  kb
transcript NM_001244628 RefSeq | MGI Sequence Detail 602 C57BL/6  
polypeptide NP_001231557 RefSeq | MGI Sequence Detail 175 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 17
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory