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Foxn3 Gene Detail
Summary
  • Symbol
    Foxn3
  • Name
    forkhead box N3
  • Synonyms
    5430426H20Rik, Ches1, Ches1l, HTLFL1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918625
    NCBI Gene: 71375
  • Gene Overview
    MyGene.info: FOXN3
Location & Maps
more
  • Sequence Map
    Chr12:99194980-99450111 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      255132 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 49.93 cM, cytoband F1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    FOXN3, forkhead box N3
  • Vertebrate Orthologs
    4
  • Human Ortholog
    FOXN3, forkhead box N3
    Orthology source: HGNC
  • Synonyms
    C14orf116, CHES1, PRO1635
  • Links
    NCBI Gene ID: 1112
    neXtProt AC: NX_O00409

  • Chr Location
    14q31.3; chr14:89156172-89619150 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    57
  • Chemically induced (other)
    1
  • Gene trapped
    56
  • Genomic Mutations
    1 involving Foxn3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042153 VEGA Gene Model | MGI Sequence Detail 255132 C57BL/6J ±  kb
transcript OTTMUST00000110608 VEGA | MGI Sequence Detail 2803 Not Applicable  
polypeptide OTTMUSP00000061739 VEGA | MGI Sequence Detail 457 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    2685 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000007638 forkhead box protein N3
  • InterPro Domains
    IPR001766 Fork head domain
    IPR018122 Fork head domain conserved site1
    IPR030456 Fork head domain conserved site 2
    IPR011991 Winged helix-turn-helix DNA-binding domain
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 8
Other
Accession IDs
less
MGI:1276572, MGI:2144745, MGI:2145044
References
more
  • Summaries
    All 41
    Developmental Gene Expression 5
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:43593 Schorpp M, et al., Characterization of mouse and human nude genes. Immunogenetics. 1997;46(6):509-15
  • Latest
    J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory