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5430431A17Rik Gene Detail
Summary
  • Symbol
    5430431A17Rik
  • Name
    RIKEN cDNA 5430431A17 gene
  • Synonyms
    Gm45123
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918618
    NCBI Gene: 71368
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:44484517-44485413 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    70 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918618
lncRNA gene Chr7:44473538-44486138 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007172
lincRNA gene Chr7:44658089-44658967 (+)
A/J MGP_AJ_G0007168
lincRNA gene Chr7:43840002-43840898 (+)
AKR/J MGP_AKRJ_G0007138
lincRNA gene Chr7:45042348-45043226 (+)
BALB/cJ MGP_BALBcJ_G0007147
lincRNA gene Chr7:43836978-43837871 (+)
C3H/HeJ MGP_C3HHeJ_G0007090
lincRNA gene Chr7:45533620-45534498 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007316
lincRNA gene Chr7:46912318-46913210 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006528
lincRNA gene Chr7:46425261-46426168 (+)
CAST/EiJ MGP_CASTEiJ_G0006994
lincRNA gene Chr7:36911318-36912219 (+)
CBA/J MGP_CBAJ_G0007073
lincRNA gene Chr7:48441083-48441961 (+)
DBA/2J MGP_DBA2J_G0007094
lincRNA gene Chr7:43514430-43515340 (+)
FVB/NJ MGP_FVBNJ_G0007117
lincRNA gene Chr7:43250221-43251099 (+)
LP/J MGP_LPJ_G0007176
lincRNA gene Chr7:45340943-45341821 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007095
lincRNA gene Chr7:47187888-47188766 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007319
lincRNA gene Chr7:44257750-44258644 (+)
PWK/PhJ MGP_PWKPhJ_G0006935
lincRNA gene Chr7:36862812-36863753 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006845
lincRNA gene Chr7:32267884-32268796 (+)
WSB/EiJ MGP_WSBEiJ_G0007054
lincRNA gene Chr7:44721324-44722211 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    1 phenotype reference
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit myogenic defects and premature death.
Expression
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  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 71368 NCBI Gene Model | MGI Sequence Detail 897 C57BL/6J ±  kb
transcript NR_131001 RefSeq | MGI Sequence Detail 795 C57BL/6  
For the selected sequence
Molecular
Reagents
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  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
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MGI:5753699
References
more
  • Summaries
    All 14
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:268408 Liang T, et al., lncRNA AK017368 promotes proliferation and suppresses differentiation of myoblasts in skeletal muscle development by attenuating the function of miR-30c. FASEB J. 2018 Jan;32(1):377-389

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory