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5430435K18Rik Gene Detail
Summary
  • Symbol
    5430435K18Rik
  • Name
    RIKEN cDNA 5430435K18 gene
  • Synonyms
    Gm42904
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918607
    NCBI Gene: 71357
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:151252305-151259264 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    93 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918607
lncRNA gene Chr5:151252305-151261400 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006888
lincRNA gene Chr5:157253464-157264705 (+)
A/J MGP_AJ_G0006882
lincRNA gene Chr5:150503184-150507750 (+)
AKR/J MGP_AKRJ_G0006852
lincRNA gene Chr5:155152597-155156954 (+)
BALB/cJ MGP_BALBcJ_G0006858
lincRNA gene Chr5:151762293-151769258 (+)
C3H/HeJ MGP_C3HHeJ_G0006803
lincRNA gene Chr5:156148785-156153126 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007023
lincRNA gene Chr5:162958352-162964885 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006273
lincRNA gene Chr5:144824885-144829034 (+)
CAST/EiJ MGP_CASTEiJ_G0006722
lincRNA gene Chr5:155846329-155853190 (+)
CBA/J MGP_CBAJ_G0006785
lincRNA gene Chr5:169839882-169846497 (+)
DBA/2J MGP_DBA2J_G0006805
lincRNA gene Chr5:150144776-150149903 (+)
FVB/NJ MGP_FVBNJ_G0006828
lincRNA gene Chr5:149393346-149398294 (+)
LP/J MGP_LPJ_G0006888
lincRNA gene Chr5:157892377-157898155 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006810
lincRNA gene Chr5:171853182-171861115 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007025
lincRNA gene Chr5:155105126-155111314 (+)
PWK/PhJ MGP_PWKPhJ_G0006663
lincRNA gene Chr5:149329278-149335563 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006571
lincRNA gene Chr5:152403629-152414849 (+)
WSB/EiJ MGP_WSBEiJ_G0006776
lincRNA gene Chr5:155919954-155926119 (+)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107387 Ensembl Gene Model | MGI Sequence Detail 6960 C57BL/6J ±  kb
transcript ENSMUST00000202597 Ensembl | MGI Sequence Detail 661 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:5663041
References
more
  • Summaries
    All 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory