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5430427M07Rik Gene Detail
Summary
  • Symbol
    5430427M07Rik
  • Name
    RIKEN cDNA 5430427M07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918599
    NCBI Gene: 71349
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr12:91045848-91056636 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 44.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    149 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918599
lncRNA gene Chr12:91045848-91079907 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003154
antisense lncRNA gene Chr12:92179359-92204093 (+)
A/J MGP_AJ_G0003131
antisense lncRNA gene Chr12:88723753-88747524 (+)
AKR/J MGP_AKRJ_G0003111
antisense lncRNA gene Chr12:91104908-91133622 (+)
BALB/cJ MGP_BALBcJ_G0003118
antisense lncRNA gene Chr12:89013595-89042468 (+)
C3H/HeJ MGP_C3HHeJ_G0003074
antisense lncRNA gene Chr12:91718795-91742617 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003261
antisense lncRNA gene Chr12:94895301-94925516 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002794
antisense lncRNA gene Chr12:86200499-86226701 (+)
CAST/EiJ MGP_CASTEiJ_G0003043
antisense lncRNA gene Chr12:86634463-86660607 (+)
CBA/J MGP_CBAJ_G0003071
antisense lncRNA gene Chr12:98453967-98480974 (+)
DBA/2J MGP_DBA2J_G0003076
antisense lncRNA gene Chr12:88201010-88224782 (+)
FVB/NJ MGP_FVBNJ_G0003096
antisense lncRNA gene Chr12:87068513-87095211 (+)
LP/J MGP_LPJ_G0003151
antisense lncRNA gene Chr12:91966026-91992830 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003085
antisense lncRNA gene Chr12:101232256-101259826 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003265
antisense lncRNA gene Chr12:90716428-90746608 (+)
PWK/PhJ MGP_PWKPhJ_G0003001
antisense lncRNA gene Chr12:82784034-82812566 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002945
antisense lncRNA gene Chr12:84888642-84914018 (+)
WSB/EiJ MGP_WSBEiJ_G0003074
antisense lncRNA gene Chr12:91449415-91473244 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71349 NCBI Gene Model | MGI Sequence Detail 10789 C57BL/6J ±  kb
transcript NR_045858 RefSeq | MGI Sequence Detail 1023 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory