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5430434I15Rik Gene Detail
Summary
  • Symbol
    5430434I15Rik
  • Name
    RIKEN cDNA 5430434I15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918592
    NCBI Gene: 71342
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:38203151-38208119 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    148 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918592
lncRNA gene Chr3:38203151-38208119 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006166
lincRNA gene Chr3:36076320-36081244 (-)
A/J MGP_AJ_G0006158
lincRNA gene Chr3:35336861-35341785 (-)
AKR/J MGP_AKRJ_G0006134
lincRNA gene Chr3:36017917-36022890 (-)
BALB/cJ MGP_BALBcJ_G0006134
lincRNA gene Chr3:35100900-35105868 (-)
C3H/HeJ MGP_C3HHeJ_G0006084
lincRNA gene Chr3:36060281-36065205 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006296
lincRNA gene Chr3:37732371-37737339 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005607
lincRNA gene Chr3:33024479-33029426 (-)
CAST/EiJ MGP_CASTEiJ_G0006019
lincRNA gene Chr3:35965058-35970827 (-)
CBA/J MGP_CBAJ_G0006069
lincRNA gene Chr3:38754634-38759558 (-)
DBA/2J MGP_DBA2J_G0006088
lincRNA gene Chr3:34792217-34797141 (-)
FVB/NJ MGP_FVBNJ_G0006112
lincRNA gene Chr3:34227490-34232434 (-)
LP/J MGP_LPJ_G0006170
lincRNA gene Chr3:36887824-36892748 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006102
lincRNA gene Chr3:41229754-41235633 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006300
lincRNA gene Chr3:35864901-35869851 (-)
PWK/PhJ MGP_PWKPhJ_G0005964
lincRNA gene Chr3:34483081-34488014 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005873
lincRNA gene Chr3:35223693-35228613 (-)
WSB/EiJ MGP_WSBEiJ_G0006066
lincRNA gene Chr3:35880465-35885415 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71342 NCBI Gene Model | MGI Sequence Detail 4969 C57BL/6J ±  kb
transcript NR_040541 RefSeq | MGI Sequence Detail 1257 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Diseases 1
    Phenotypes 6
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory