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Riok1 Gene Detail
Summary
  • Symbol
    Riok1
  • Name
    RIO kinase 1
  • Synonyms
    3110046C13Rik, 5430416A05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918590
    NCBI Gene: 71340
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:38036995-38061433 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 17.91 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    396 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918590
protein coding gene Chr13:38036989-38061433 (.)
129S1/SvImJ MGP_129S1SvImJ_G0020469
protein coding gene Chr13:36353180-36377589 (+)
A/J MGP_AJ_G0020423
protein coding gene Chr13:35209216-35233727 (+)
AKR/J MGP_AKRJ_G0020401
protein coding gene Chr13:36140750-36165551 (+)
BALB/cJ MGP_BALBcJ_G0020419
protein coding gene Chr13:35309234-35333618 (+)
C3H/HeJ MGP_C3HHeJ_G0020218
protein coding gene Chr13:35966117-35991488 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020852
protein coding gene Chr13:37534428-37559410 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018439
protein coding gene Chr13:33387081-33412240 (+)
CAST/EiJ MGP_CASTEiJ_G0019733
protein coding gene Chr13:35733757-35762984 (+)
CBA/J MGP_CBAJ_G0020179
protein coding gene Chr13:39135763-39160206 (+)
DBA/2J MGP_DBA2J_G0020301
protein coding gene Chr13:34727178-34751621 (+)
FVB/NJ MGP_FVBNJ_G0020280
protein coding gene Chr13:34266411-34291056 (+)
LP/J MGP_LPJ_G0020376
protein coding gene Chr13:36594132-36623677 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020310
protein coding gene Chr13:39238682-39263117 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020895
protein coding gene Chr13:35706944-35731388 (+)
PWK/PhJ MGP_PWKPhJ_G0019488
protein coding gene Chr13:34852981-34877959 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019319
protein coding gene Chr13:34370896-34416683 (+)
WSB/EiJ MGP_WSBEiJ_G0019795
protein coding gene Chr13:36052418-36077438 (+)



Homology
more
  • Human Ortholog
    RIOK1, RIO kinase 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RIOK1, RIO kinase 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AD034, bA288G3.1, RIO1, RRP10
  • Links
    NCBI Gene ID: 83732
    neXtProt AC: NX_Q9BRS2
    UniProt: Q9BRS2

  • Chr Location
    6p24.3; chr6:7389816-7418037 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021428 Ensembl Gene Model | MGI Sequence Detail 24439 C57BL/6J ±  kb
transcript ENSMUST00000021866 Ensembl | MGI Sequence Detail 2738 Not Applicable  
polypeptide ENSMUSP00000021866 Ensembl | MGI Sequence Detail 567 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 72
    cDNA 72

    Microarray probesets 5
Other
Accession IDs
less
MGI:1920472, MGI:2145325
References
more
  • Summaries
    All 35
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:237787 Liu X, et al., Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA. BMC Immunol. 2016 Aug 02;17(1):25

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory