About   Help   FAQ
Rcbtb1
Gene Detail
Symbol

Name
ID
Rcbtb1
regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
MGI:1918580
Synonyms
5430409I18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 14
31.47 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr14:59201209-59237265 bp, + strand
From VEGA annotation of GRCm38

  36057 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Rcbtb1
Mutations,
alleles, and
phenotypes
All mutations/alleles(51) : Gene trapped(48) Targeted(3)
Incidental mutations (data from APF )
Interactions
Rcbtb1 interacts with 233 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process cell cycle, chromatin modification, ...
Component nucleus
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (29)    Tissues (29)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 29
cDNA source data(75)
External Resources: Allen Institute   Expression Atlas
Molecular
reagents
All nucleic(75) cDNA(75)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000026152 (Evidence)
Ensembl Gene ModelENSMUSG00000035469 (Evidence)
Entrez Gene71330, 102631642
UniGene234195
DFCITC1596035, TC1591096, TC1577486
DoTSDT.101179493, DT.50316400, DT.55147850
NIA Mouse Gene IndexU015707
Consensus CDS ProjectCCDS27168.1
International Mouse Knockout Project StatusRcbtb1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026152 VEGA Gene Model | MGI Sequence Detail 36057 C57BL/6J ±  kb
transcript OTTMUST00000064591 VEGA | MGI Sequence Detail 3903 Not Applicable 
polypeptide OTTMUSP00000032104 VEGA | MGI Sequence Detail 531 Not Applicable 

For the selected sequences
All sequences(74) RefSeq(1) UniProt(13)
Polymorphisms
SNPs within 2kb(87 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013069 BTB/POZ
InterPro IPR011333 BTB/POZ fold
InterPro IPR000210 BTB/POZ-like
InterPro IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
InterPro IPR000408 Regulator of chromosome condensation, RCC1
Protein Ontology PR:000013832 RCC1 and BTB domain-containing protein 1
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(39)
Other
accession IDs
MGI:2145800

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/09/2014
MGI 5.20
The Jackson Laboratory