Rcbtb1
Gene Detail

Symbol Name ID

Rcbtb1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 MGI:1918580

Synonyms

5430409I18Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 14

31.47 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr14:59201209-59237265 bp, + strand From VEGA annotation of GRCm38   36057 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Rcbtb1 ± 2 cM)

Gene Tree: Rcbtb1

Human ortholog

RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 NCBI Gene ID 55213
Human Synonyms: CLLD7, CLLL7, GLP, RP11-185C18.1
Human Chr13:50106082-50159719 bp, - strand Reference GRCh37.p2 Primary Assembly
Human Diseases Associated with Human RCBTB1 (1)

Alleles and phenotypes

All alleles(50) : Targeted(2) Gene trapped(48)

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	cell cycle, chromatin modification, ...
Component	nucleus

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (29)    Tissues (29)    Images (4)
Theiler Stages: 17, 18, 21, 23

Assay Type	Results
RNA in situ	29

cDNA source data(78)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(78) cDNA(78)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000026152 (Evidence)
Ensembl Gene Model	ENSMUSG00000035469 (Evidence)
Entrez Gene	71330 (Evidence)
UniGene	234195
DFCI	TC1577486, TC1591096, TC1596035
DoTS	DT.101179493, DT.110760076, DT.50316400, DT.55147850
NIA Mouse Gene Index	U015707
Consensus CDS Project	CCDS27168.1
International Mouse Knockout Project Status	Rcbtb1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026152	VEGA Gene Model | MGI Sequence Detail	36057	C57BL/6J
transcript	OTTMUST00000064591	VEGA | MGI Sequence Detail	3903	Not Applicable
polypeptide	OTTMUSP00000032104	VEGA | MGI Sequence Detail	531	Not Applicable

All sequences(74) RefSeq(2) UniProt(7)

Polymorphisms

SNPs(72 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR013069	BTB/POZ
InterPro	IPR011333	BTB/POZ fold
InterPro	IPR000210	BTB/POZ-like
InterPro	IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II
InterPro	IPR000408	Regulator of chromosome condensation, RCC1
Protein Ontology	PR:000013832	RCC1 and BTB domain-containing protein 1

References

(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(38)

Other accession IDs

MGI:2145800