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Tchhl1 Gene Detail
Summary
  • Symbol
    Tchhl1
  • Name
    trichohyalin-like 1
  • Synonyms
    5430400H23Rik, S100a17, Thhl1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918575
    NCBI Gene: 71325
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:93468754-93471980 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.51 cM, cytoband F2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918575
protein coding gene Chr3:93468754-93471980 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027535
protein coding gene Chr3:93959936-93963162 (+)
A/J MGP_AJ_G0027500
protein coding gene Chr3:91046179-91049405 (+)
AKR/J MGP_AKRJ_G0027468
protein coding gene Chr3:93146010-93149236 (+)
BALB/cJ MGP_BALBcJ_G0027509
protein coding gene Chr3:90800589-90803815 (+)
C3H/HeJ MGP_C3HHeJ_G0027247
protein coding gene Chr3:93366060-93369286 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027952
protein coding gene Chr3:97533726-97536952 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025302
protein coding gene Chr3:87639961-87643172 (+)
CAST/EiJ MGP_CASTEiJ_G0026695
protein coding gene Chr3:92806434-92809653 (+)
CBA/J MGP_CBAJ_G0027223
protein coding gene Chr3:100939811-100943037 (+)
DBA/2J MGP_DBA2J_G0027360
protein coding gene Chr3:90352400-90355626 (+)
FVB/NJ MGP_FVBNJ_G0027329
protein coding gene Chr3:88474687-88477913 (+)
LP/J MGP_LPJ_G0027470
protein coding gene Chr3:95213426-95216652 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027355
protein coding gene Chr3:107176784-107180018 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028011
protein coding gene Chr3:92870262-92873488 (+)
PWK/PhJ MGP_PWKPhJ_G0026424
protein coding gene Chr3:90213391-90216618 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026244
protein coding gene Chr3:91224963-91228183 (+)
WSB/EiJ MGP_WSBEiJ_G0026778
protein coding gene Chr3:93254185-93257411 (+)



Homology
more
  • Human Ortholog
    TCHHL1, trichohyalin like 1
  • Vertebrate Orthologs
    5
  • Human Ortholog
    TCHHL1, trichohyalin like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    S100A17, THHL1
  • Links
    NCBI Gene ID: 126637
    neXtProt AC: NX_Q5QJ38
    UniProt: Q5QJ38

  • Chr Location
    1q21.3; chr1:152084144-152089064 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71325 NCBI Gene Model | MGI Sequence Detail 3227 C57BL/6J ±  kb
transcript NM_027762 RefSeq | MGI Sequence Detail 2066 C57BL/6  
polypeptide Q9D3P1 UniProt | EBI | MGI Sequence Detail 638 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 26
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139596
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:218234 Wurm S, et al., Terminal epidermal differentiation is regulated by the interaction of Fra-2/AP-1 with Ezh2 and ERK1/2. Genes Dev. 2015 Jan 15;29(2):144-56

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory