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4933439K11Rik Gene Detail
Summary
  • Symbol
    4933439K11Rik
  • Name
    RIKEN cDNA 4933439K11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918569
    NCBI Gene: 71319
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:172541620-172550806 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 79.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918569
lncRNA gene Chr1:172538133-172558129 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015126
unclassified non-coding RNA gene Chr1:178412263-178431939 (-)
A/J MGP_AJ_G0015100
unclassified non-coding RNA gene Chr1:171123926-171143569 (-)
AKR/J MGP_AKRJ_G0015063
unclassified non-coding RNA gene Chr1:176281116-176300800 (-)
BALB/cJ MGP_BALBcJ_G0015063
unclassified non-coding RNA gene Chr1:171654849-171674901 (-)
C3H/HeJ MGP_C3HHeJ_G0014886
unclassified non-coding RNA gene Chr1:176855316-176875568 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015519
unclassified non-coding RNA gene Chr1:184335684-184356866 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013265
unclassified non-coding RNA gene Chr1:162809417-162829153 (-)
CAST/EiJ MGP_CASTEiJ_G0014440
unclassified non-coding RNA gene Chr1:176224818-176246179 (-)
CBA/J MGP_CBAJ_G0014865
unclassified non-coding RNA gene Chr1:190884421-190906798 (-)
DBA/2J MGP_DBA2J_G0014958
unclassified non-coding RNA gene Chr1:170042130-170061666 (-)
FVB/NJ MGP_FVBNJ_G0014969
unclassified non-coding RNA gene Chr1:168300823-168320803 (-)
LP/J MGP_LPJ_G0015040
unclassified non-coding RNA gene Chr1:179492879-179514410 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014996
unclassified non-coding RNA gene Chr1:198114996-198136312 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015558
unclassified non-coding RNA gene Chr1:176156137-176175832 (-)
PWK/PhJ MGP_PWKPhJ_G0014232
unclassified non-coding RNA gene Chr1:169425035-169445205 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014020
unclassified non-coding RNA gene Chr1:175113852-175134352 (-)
WSB/EiJ MGP_WSBEiJ_G0014543
unclassified non-coding RNA gene Chr1:176303185-176324247 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71319 NCBI Gene Model | MGI Sequence Detail 9187 C57BL/6J ±  kb
transcript NR_040558 RefSeq | MGI Sequence Detail 941 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory