About   Help   FAQ
Tbc1d9 Gene Detail
Summary
  • Symbol
    Tbc1d9
  • Name
    TBC1 domain family, member 9
  • Synonyms
    4933431N12Rik, C76116
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918560
    NCBI Gene: 71310
  • Gene Overview
    MyGene.info: TBC1D9
Location & Maps
more
  • Sequence Map
    Chr8:83165352-83272934 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      107583 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 39.59 cM, cytoband C3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    TBC1D9, TBC1 domain family member 9
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TBC1D9, TBC1 domain family member 9
    Orthology source: HGNC, HomoloGene
  • Synonyms
    GRAMD9, MDR1
  • Links
    NCBI Gene ID: 23158
    neXtProt AC: NX_Q6ZT07

  • Chr Location
    4q31.21; chr4:140620782-140756317 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    30 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    1
  • Gene trapped
    3
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Tbc1d9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031541 VEGA Gene Model | MGI Sequence Detail 107583 C57BL/6J ±  kb
transcript OTTMUST00000078142 VEGA | MGI Sequence Detail 5334 Not Applicable  
polypeptide OTTMUSP00000041506 VEGA | MGI Sequence Detail 1264 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1502 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 64
    cDNA 64

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142627, MGI:2142788, MGI:3034735
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 30
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/19/2016
MGI 6.04
The Jackson Laboratory