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Platr20 Gene Detail
Summary
  • Symbol
    Platr20
  • Name
    pluripotency associated transcript 20
  • Synonyms
    5133400J02Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918547
    NCBI Gene: 71297
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:51080660-51111245 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 31.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    930 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918547
 lncRNA gene Chr11:51064847-51111406 (-)
129S1/SvImJ ENSMUSG00200040394
 lncRNA gene Chr11:48051799-48098234 (-)
A/J ENSMUSG00195038104
 lncRNA gene Chr11:47994804-48041236 (-)
AKR/J ENSMUSG00220040186
 lncRNA gene Chr11:48183645-48230097 (-)
BALB/cJ ENSMUSG00180036428
 lncRNA gene Chr11:48056272-48102683 (-)
C3H/HeJ ENSMUSG00175040952
 lncRNA gene Chr11:48026335-48072782 (-)
C57BL/6NJ ENSMUSG00215038919
 lncRNA gene Chr11:47936080-47974170 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004737
 lincRNA gene Chr11:46094553-46126396 (-)
CAST/EiJ ENSTCUG00005044166
 lncRNA gene Chr11:47614733-47670020 (-)
CBA/J ENSMUSG00210030536
 lncRNA gene Chr11:47882332-47928775 (-)
DBA/2J ENSMUSG00185028133
 lncRNA gene Chr11:48091566-48138007 (-)
FVB/NJ ENSMUSG00205038964
 lncRNA gene Chr11:47924682-47971115 (-)
JF1/MsJ ENSUMUG00000041710
 lncRNA gene Chr11:48445653-48493567 (-)
LP/J ENSMUSG00230033773
 lncRNA gene Chr11:49275566-49322016 (-)
NOD/ShiLtJ ENSMUSG00190043962
 lncRNA gene Chr11:48155595-48201929 (-)
NZO/HlLtJ ENSMUSG00225033153
 lncRNA gene Chr11:51302833-51350794 (-)
PWK/PhJ ENSLUMG00010033663
 lncRNA gene Chr11:47913185-47961219 (-)
SPRET/EiJ ENSMSPG00010019831
 lncRNA gene Chr11:48569811-48621744 (-)
WSB/EiJ ENSIUOG00005040828
 lncRNA gene Chr11:47939863-47986235 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    600
  • Tissues
    1
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    100
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 71297 NCBI Gene Model | MGI Sequence Detail 30586 C57BL/6J ±  kb
transcript NR_110444 RefSeq | MGI Sequence Detail 937 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 2
    Primer pair 1
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:324527 Matoba S, et al., Noncanonical imprinting sustains embryonic development and restrains placental overgrowth. Genes Dev. 2022 Apr 1;36(7-8):483-494
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory