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Apobec4
Gene Detail
Symbol

Name
ID
Apobec4
apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
MGI:1918531
Synonyms
4933431M11Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
65.01 cM, cytoband G2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:152750551-152757544 bp, + strand
From VEGA annotation of GRCm38

  6994 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:52415  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Apobec4

Human
homologs
Human Homolog APOBEC4, apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
NCBI Gene ID 403314
neXtProt AC  NX_Q8WW27
Human Synonyms  C1orf169
Human Chr (Location)  chr1:183646275-183653313 (-)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Apobec4 interacts with 58 markers (Mir19a, Mir19b-1, Mir19b-2, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(3)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(4) cDNA(3) Other(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000019687 (Evidence)
Ensembl Gene ModelENSMUSG00000055547 (Evidence)
Entrez Gene71281 (Evidence)
UniGene158650
DFCITC1599055
DoTSDT.55260113
NIA Mouse Gene IndexU000920
EC3.5.4.-
Consensus CDS ProjectCCDS35738.1
International Mouse Knockout Project StatusApobec4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019687 VEGA Gene Model | MGI Sequence Detail 6994 C57BL/6J ±  kb
transcript OTTMUST00000047134 VEGA | MGI Sequence Detail 1566 Not Applicable 
polypeptide OTTMUSP00000021287 VEGA | MGI Sequence Detail 374 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(116 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013158 APOBEC-like, N-terminal
Protein Ontology PR:000031686 C->U-editing enzyme APOBEC-4
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory