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Ccdc57 Gene Detail
Summary
  • Symbol
    Ccdc57
  • Name
    coiled-coil domain containing 57
  • Synonyms
    4933434G05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918526
    NCBI Gene: 71276
  • Gene Overview
    MyGene.info: CCDC57
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:120826529-120932872 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 84.59 cM, cytoband E2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    167 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918526
protein coding gene Chr11:120826529-120932902 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019532
protein coding gene Chr11:125333647-125445548 (-)
A/J MGP_AJ_G0019499
protein coding gene Chr11:119738191-119845796 (-)
AKR/J MGP_AKRJ_G0019469
protein coding gene Chr11:123359854-123474863 (-)
BALB/cJ MGP_BALBcJ_G0019474
protein coding gene Chr11:120098252-120206293 (-)
C3H/HeJ MGP_C3HHeJ_G0019280
protein coding gene Chr11:123686977-123798248 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019923
protein coding gene Chr11:129133589-129251379 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017548
protein coding gene Chr11:116727243-116834646 (-)
CAST/EiJ MGP_CASTEiJ_G0018834
protein coding gene Chr11:125189294-125306753 (-)
CBA/J MGP_CBAJ_G0019251
protein coding gene Chr11:134158264-134277149 (-)
DBA/2J MGP_DBA2J_G0019364
protein coding gene Chr11:119111430-119221566 (-)
FVB/NJ MGP_FVBNJ_G0019355
protein coding gene Chr11:118825498-118936927 (-)
LP/J MGP_LPJ_G0019435
protein coding gene Chr11:125623164-125730276 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019388
protein coding gene Chr11:132990501-133104447 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019962
protein coding gene Chr11:124030045-124149588 (-)
PWK/PhJ MGP_PWKPhJ_G0018600
protein coding gene Chr11:120549208-120659036 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018392
protein coding gene Chr11:123791442-123905259 (-)
WSB/EiJ MGP_WSBEiJ_G0018887
protein coding gene Chr11:124019426-124133089 (-)



Homology
more
  • Human Ortholog
    CCDC57, coiled-coil domain containing 57
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCDC57, coiled-coil domain containing 57
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 284001
    neXtProt AC: NX_Q2TAC2
    UniProt: Q2TAC2

  • Chr Location
    17q25.3; chr17:82101458-82212892 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048445 Ensembl Gene Model | MGI Sequence Detail 106344 C57BL/6J ±  kb
transcript ENSMUST00000056781 Ensembl | MGI Sequence Detail 3403 Not Applicable  
polypeptide ENSMUSP00000050996 Ensembl | MGI Sequence Detail 1016 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 22

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory