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4933434M16Rik Gene Detail
Summary
  • Symbol
    4933434M16Rik
  • Name
    RIKEN cDNA 4933434M16 gene
  • Synonyms
    4930468F18Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918453
    NCBI Gene: 71203
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:112715980-112723295 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 77.58 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918453
 lncRNA gene Chr11:112715980-112723295 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005311
 lincRNA gene Chr11:116581908-116589166 (+)
A/J MGP_AJ_G0005294
 lincRNA gene Chr11:111577766-111586024 (+)
AKR/J MGP_AKRJ_G0005273
 lincRNA gene Chr11:114854588-114861843 (+)
BALB/cJ MGP_BALBcJ_G0005276
 lincRNA gene Chr11:111971070-111978318 (+)
C3H/HeJ MGP_C3HHeJ_G0005225
 lincRNA gene Chr11:115205852-115214251 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005428
 lincRNA gene Chr11:120098908-120108064 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004818
 lincRNA gene Chr11:108673577-108680955 (+)
CAST/EiJ MGP_CASTEiJ_G0005172
 lincRNA gene Chr11:116433295-116440561 (+)
CBA/J MGP_CBAJ_G0005214
 lincRNA gene Chr11:125008258-125015540 (+)
DBA/2J MGP_DBA2J_G0005232
 lincRNA gene Chr11:111018325-111025589 (+)
FVB/NJ MGP_FVBNJ_G0005257
 lincRNA gene Chr11:110462860-110470109 (+)
LP/J MGP_LPJ_G0005313
 lincRNA gene Chr11:117019311-117028110 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005239
 lincRNA gene Chr11:124183693-124192177 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005432
 lincRNA gene Chr11:115494482-115503013 (+)
PWK/PhJ MGP_PWKPhJ_G0005121
 lincRNA gene Chr11:112201120-112208699 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005042
 lincRNA gene Chr11:115281494-115288656 (+)
WSB/EiJ MGP_WSBEiJ_G0005220
 lincRNA gene Chr11:115428466-115438496 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    24
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020624 Ensembl Gene Model | MGI Sequence Detail 7316 C57BL/6J ±  kb
transcript ENSMUST00000153429 Ensembl | MGI Sequence Detail 1940 Not Applicable  
polypeptide Q9D3U1 UniProt | EBI | MGI Sequence Detail 122 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:1922200
References
more
  • Summaries
    All 13
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory