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Ints13 Gene Detail
Summary
  • Symbol
    Ints13
  • Name
    integrator complex subunit 13
  • Synonyms
    4933424B01Rik, Asun, Spata30
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918427
    NCBI Gene: 71177
  • Gene Overview
    MyGene.info: INTS13
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:146549632-146577835 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 77.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    327 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918427
 protein coding gene Chr6:146549632-146577835 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031486
 protein coding gene Chr6:151572008-151606348 (-)
A/J MGP_AJ_G0031461
 protein coding gene Chr6:145569613-145601835 (-)
AKR/J MGP_AKRJ_G0031389
 protein coding gene Chr6:149885350-149915393 (-)
BALB/cJ MGP_BALBcJ_G0031469
 protein coding gene Chr6:145306127-145340385 (-)
C3H/HeJ MGP_C3HHeJ_G0031190
 protein coding gene Chr6:149953251-149983729 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031930
 protein coding gene Chr6:155622146-155650628 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029054
 protein coding gene Chr6:144284955-144316249 (-)
CAST/EiJ MGP_CASTEiJ_G0030558
 protein coding gene Chr6:149580044-149611446 (-)
CBA/J MGP_CBAJ_G0031150
 protein coding gene Chr6:161550292-161583395 (-)
DBA/2J MGP_DBA2J_G0031306
 protein coding gene Chr6:144352274-144382783 (-)
FVB/NJ MGP_FVBNJ_G0031258
 protein coding gene Chr6:143082062-143113867 (-)
LP/J MGP_LPJ_G0031391
 protein coding gene Chr6:151662141-151693929 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031298
 protein coding gene Chr6:165295237-165332970 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031963
 protein coding gene Chr6:149716422-149747602 (-)
PWK/PhJ MGP_PWKPhJ_G0030285
 protein coding gene Chr6:142860245-142892339 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030109
 protein coding gene Chr6:147862530-147893885 (-)
WSB/EiJ MGP_WSBEiJ_G0030651
 protein coding gene Chr6:150344467-150376644 (-)



Homology
more
  • Human Ortholog
    INTS13, integrator complex subunit 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    INTS13, integrator complex subunit 13
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ASUN, C12orf11, GCT1, Mat89Bb, NET48, SPATA30
  • Links
    NCBI Gene ID: 55726
    neXtProt AC: NX_Q9NVM9
    UniProt: Q9NVM9

  • Chr Location
    12p11.23; chr12:26905171-26938326 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 10043
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: INTS13
  • Gene Tree
    Ints13
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    80
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71177 NCBI Gene Model | MGI Sequence Detail 28204 C57BL/6J ±  kb
transcript NM_001362106 RefSeq | MGI Sequence Detail 3083 C57BL/6  
polypeptide Q8QZV7 UniProt | EBI | MGI Sequence Detail 732 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR019355 Cell cycle regulator Mat89Bb
Molecular
Reagents
less
  • All nucleic 80
    cDNA 80

    Microarray probesets 6
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:241055 Jodoin JN, et al., Nuclear-localized Asunder regulates cytoplasmic dynein localization via its role in the integrator complex. Mol Biol Cell. 2013 Sep;24(18):2954-65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/08/2019
MGI 6.14 		The Jackson Laboratory