About   Help   FAQ
Nbas
Gene Detail
Symbol

Name
ID
Nbas
neuroblastoma amplified sequence
MGI:1918419
Synonyms
4933425L03Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 12
6.45 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr12:13269127-13583810 bp, + strand
From Ensembl annotation of GRCm38

  314684 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41073  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: NBAS
Gene Tree: Nbas

Human
homologs
NBAS, neuroblastoma amplified sequence
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 51594
neXtProt AC: NX_A2RRP1

Human Synonyms: NAG, SOPH

Human Chr (Location): 2p24; chr2:15166908-15561348 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human NBAS

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(8) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Nbas interacts with 102 markers (Mir10a, Mir10b, Mir15a, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(77)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase nbas ; ZFIN nbas    NEW 
Molecular
reagents
All nucleic(78) cDNA(78)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000020576 (Evidence)
Entrez Gene 71169 (Evidence)
UniGene 177520
DFCI TC1579062, TC1592622, TC1607609, TC1630199, TC1648184
DoTS DT.101275491, DT.101306518, DT.40165956, DT.94230972, DT.97404482
Consensus CDS Project CCDS49031.1
International Mouse Phenotyping Consortium Status Nbas
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020576 Ensembl Gene Model | MGI Sequence Detail 314684 C57BL/6J ±  kb
transcript ENSMUST00000042953 Ensembl | MGI Sequence Detail 7239 Not Applicable 
polypeptide ENSMUSP00000036082 Ensembl | MGI Sequence Detail 2356 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(12) UniProt(8)
Polymorphisms
SNPs within 2kb(1374 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011044 Quinoprotein amine dehydrogenase, beta chain-like
InterPro IPR013244 Secretory pathway Sec39
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000011009 neuroblastoma-amplified sequence
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/18/2015
MGI 6.0
The Jackson Laboratory