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4933423P22Rik Gene Detail
Summary
  • Symbol
    4933423P22Rik
  • Name
    RIKEN cDNA 4933423P22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918408
    NCBI Gene: 71158
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:90479236-90488425 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918408
lncRNA gene Chr2:90479236-90491096 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003603
antisense lncRNA gene Chr2:91742161-91751358 (+)
A/J MGP_AJ_G0003585
antisense lncRNA gene Chr2:88080644-88090389 (+)
AKR/J MGP_AKRJ_G0003563
antisense lncRNA gene Chr2:90517765-90531052 (+)
BALB/cJ MGP_BALBcJ_G0003574
antisense lncRNA gene Chr2:88238158-88247532 (+)
C3H/HeJ MGP_C3HHeJ_G0003521
antisense lncRNA gene Chr2:90794240-90803433 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003712
antisense lncRNA gene Chr2:94979821-94989014 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003221
antisense lncRNA gene Chr2:84603169-84612087 (+)
CAST/EiJ MGP_CASTEiJ_G0003484
antisense lncRNA gene Chr2:91296820-91306015 (+)
CBA/J MGP_CBAJ_G0003518
antisense lncRNA gene Chr2:98210908-98220091 (+)
DBA/2J MGP_DBA2J_G0003526
antisense lncRNA gene Chr2:87678569-87688265 (+)
FVB/NJ MGP_FVBNJ_G0003546
antisense lncRNA gene Chr2:86778984-86789177 (+)
LP/J MGP_LPJ_G0003603
antisense lncRNA gene Chr2:91931895-91941334 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003534
antisense lncRNA gene Chr2:101279882-101291326 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003714
antisense lncRNA gene Chr2:90561758-90572017 (+)
PWK/PhJ MGP_PWKPhJ_G0003439
antisense lncRNA gene Chr2:87389465-87398828 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003383
antisense lncRNA gene Chr2:90075872-90154225 (+)
WSB/EiJ MGP_WSBEiJ_G0003518
antisense lncRNA gene Chr2:91147251-91156412 (+)



Homology
more
  • Human Ortholog
    PTPRJ-AS1, PTPRJ antisense RNA 1
  • Human Ortholog
    PTPRJ-AS1, PTPRJ antisense RNA 1
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 104326192

  • Chr Location
    11p11.2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving 4933423P22Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085471 Ensembl Gene Model | MGI Sequence Detail 9190 C57BL/6J ±  kb
transcript ENSMUST00000126219 Ensembl | MGI Sequence Detail 4595 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory