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4933411O13Rik Gene Detail
Summary
  • Symbol
    4933411O13Rik
  • Name
    RIKEN cDNA 4933411O13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918385
    NCBI Gene: 71135
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:66689391-66707729 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 38.25 cM, cytoband C1.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918385
 lncRNA gene Chr16:66689391-66707729 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003356
 antisense lncRNA gene Chr16:66480511-66499303 (+)
A/J MGP_AJ_G0003332
 antisense lncRNA gene Chr16:63613118-63631368 (+)
AKR/J MGP_AKRJ_G0003315
 antisense lncRNA gene Chr16:65609214-65627479 (+)
BALB/cJ MGP_BALBcJ_G0003321
 antisense lncRNA gene Chr16:63840177-63860550 (+)
C3H/HeJ MGP_C3HHeJ_G0003274
 antisense lncRNA gene Chr16:65920060-65934355 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003462
 antisense lncRNA gene Chr16:68444287-68465266 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002980
 antisense lncRNA gene Chr16:62548658-62567166 (+)
CAST/EiJ MGP_CASTEiJ_G0003238
 antisense lncRNA gene Chr16:66143136-66164434 (+)
CBA/J MGP_CBAJ_G0003271
 antisense lncRNA gene Chr16:71383212-71403905 (+)
DBA/2J MGP_DBA2J_G0003276
 antisense lncRNA gene Chr16:63387916-63406447 (+)
FVB/NJ MGP_FVBNJ_G0003295
 antisense lncRNA gene Chr16:62963105-62980706 (+)
LP/J MGP_LPJ_G0003349
 antisense lncRNA gene Chr16:66314875-66335044 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003284
 antisense lncRNA gene Chr16:72782009-72812031 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003465
 antisense lncRNA gene Chr16:65708452-65727376 (+)
PWK/PhJ MGP_PWKPhJ_G0003198
 antisense lncRNA gene Chr16:63555590-63574983 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003141
 antisense lncRNA gene Chr16:65393096-65412637 (+)
WSB/EiJ MGP_WSBEiJ_G0003272
 antisense lncRNA gene Chr16:65775754-65798687 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    24
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045178 Ensembl Gene Model | MGI Sequence Detail 18339 C57BL/6J ±  kb
transcript ENSMUST00000050665 Ensembl | MGI Sequence Detail 1464 Not Applicable  
polypeptide Q9CUD1 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 13
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory