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4933411O13Rik Gene Detail
Summary
  • Symbol
    4933411O13Rik
  • Name
    RIKEN cDNA 4933411O13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918385
    NCBI Gene: 71135
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:66892503-66910841 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 38.25 cM, cytoband C1.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918385
lncRNA gene Chr16:66892503-66910841 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003356
antisense lncRNA gene Chr16:66480511-66499303 (+)
A/J MGP_AJ_G0003332
antisense lncRNA gene Chr16:63613118-63631368 (+)
AKR/J MGP_AKRJ_G0003315
antisense lncRNA gene Chr16:65609214-65627479 (+)
BALB/cJ MGP_BALBcJ_G0003321
antisense lncRNA gene Chr16:63840177-63860550 (+)
C3H/HeJ MGP_C3HHeJ_G0003274
antisense lncRNA gene Chr16:65920060-65934355 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003462
antisense lncRNA gene Chr16:68444287-68465266 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002980
antisense lncRNA gene Chr16:62548658-62567166 (+)
CAST/EiJ MGP_CASTEiJ_G0003238
antisense lncRNA gene Chr16:66143136-66164434 (+)
CBA/J MGP_CBAJ_G0003271
antisense lncRNA gene Chr16:71383212-71403905 (+)
DBA/2J MGP_DBA2J_G0003276
antisense lncRNA gene Chr16:63387916-63406447 (+)
FVB/NJ MGP_FVBNJ_G0003295
antisense lncRNA gene Chr16:62963105-62980706 (+)
LP/J MGP_LPJ_G0003349
antisense lncRNA gene Chr16:66314875-66335044 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003284
antisense lncRNA gene Chr16:72782009-72812031 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003465
antisense lncRNA gene Chr16:65708452-65727376 (+)
PWK/PhJ MGP_PWKPhJ_G0003198
antisense lncRNA gene Chr16:63555590-63574983 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003141
antisense lncRNA gene Chr16:65393096-65412637 (+)
WSB/EiJ MGP_WSBEiJ_G0003272
antisense lncRNA gene Chr16:65775754-65798687 (+)



Homology
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045178 Ensembl Gene Model | MGI Sequence Detail 18339 C57BL/6J ±  kb
transcript ENSMUST00000050665 Ensembl | MGI Sequence Detail 1464 Not Applicable  
polypeptide Q9CUD1 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 11
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory